RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 F3P13726 295 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 NPPBP16860 134 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 HNF4AP41235 474 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 CPA2P48052 419 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 C21orf59P57076 290 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 CYP2A13Q16696 494 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 XKR7Q5GH72 579 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 IQCHQ86VS3 1027 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 CPSF7Q8N684 471 aaKnown RBP16.77■□□□□ 0.27
CLDN4-201ENST00000340958 OR52E1Q8NGJ3 308 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 PTCD3Q96EY7 689 aaKnown RBP16.77■□□□□ 0.27
CLDN4-201ENST00000340958 PCBD2Q9H0N5 130 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 FARSBQ9NSD9 589 aaKnown RBP16.77■□□□□ 0.27
CLDN4-201ENST00000340958 TAAR2Q9P1P5 351 aa16.77■□□□□ 0.27
CLDN4-201ENST00000340958 WFS1O76024 890 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 EML2O95834 649 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 PDYNP01213 254 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 WNT1P04628 370 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 T-ENOLP0DO92 83 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 PCNAP12004 261 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 VARSP26640 1264 aaKnown RBP16.76■□□□□ 0.27
CLDN4-201ENST00000340958 PLA2G5P39877 138 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 MNAT1P51948 309 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 NEK2P51955 445 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 C1orf61Q13536 156 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 PRRT3Q5FWE3 981 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 PAGE2BQ5JRK9 111 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 FRG2Q64ET8 278 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 GRHL2Q6ISB3 625 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 LCTLQ6UWM7 567 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 SPATA19Q7Z5L4 167 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 LONP2Q86WA8 852 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 C17orf64Q86WR6 236 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 NRROSQ86YC3 692 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 POU5F2Q8N7G0 328 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 OR2T11Q8NH01 316 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 GPBAR1Q8TDU6 330 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 REPS1Q96D71 796 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 PPP3R2Q96LZ3 170 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 FRG2BQ96QU4 278 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 GPR27Q9NS67 375 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 TAC3Q9UHF0 121 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 KLF15Q9UIH9 416 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 PCOLCE2Q9UKZ9 415 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 DOLKQ9UPQ8 538 aa16.76■□□□□ 0.27
CLDN4-201ENST00000340958 ZFHX2Q9C0A1 2572 aaPredicted RBP16.76■□□□□ 0.27
CLDN4-201ENST00000340958 SPAG17Q6Q759 2223 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 CCDC163A0A0D9SF12 145 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 SLC22A2O15244 555 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 PIK3R1P27986 724 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 ADSLP30566 484 aaPredicted RBP16.75■□□□□ 0.27
CLDN4-201ENST00000340958 NCALDP61601 193 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 SRSF5Q13243 272 aaKnown RBP16.75■□□□□ 0.27
CLDN4-201ENST00000340958 DDX39BQ13838 428 aaKnown RBP16.75■□□□□ 0.27
CLDN4-201ENST00000340958 PLCL1Q15111 1095 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 AP5B1Q2VPB7 878 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 CATSPEREQ5SY80 951 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 CHSY3Q70JA7 882 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 LRRC56Q8IYG6 542 aaPredicted RBP16.75■□□□□ 0.27
CLDN4-201ENST00000340958 LCN9Q8WX39 176 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 FAM122AQ96E09 287 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 C1orf50Q9BV19 199 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 DUSP15Q9H1R2 295 aaPredicted RBP16.75■□□□□ 0.27
CLDN4-201ENST00000340958 KCNE1BA0A087WTH5 132 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 PRAMEF33A0A0G2JMD5 474 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 A0A1W2PR77 199 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 PSMD12O00232 456 aaPredicted RBP16.75■□□□□ 0.27
CLDN4-201ENST00000340958 VIPP01282 170 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 C1GALT1C1LP0DN25 315 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 THRAP10827 490 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 SLC2A4P14672 509 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 IDO1P14902 403 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 NME5P56597 212 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 ERVK-8P63133 956 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 HMGCS1Q01581 520 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 ACTN3Q08043 901 aaPredicted RBP16.75■□□□□ 0.27
CLDN4-201ENST00000340958 NAA25Q14CX7 972 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 MED27Q6P2C8 311 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 SLCO4C1Q6ZQN7 724 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 WDR5BQ86VZ2 330 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 MIER2Q8N344 545 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 SFRP1Q8N474 314 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 USP7Q93009 1102 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 NRTNQ99748 197 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 EFCAB11Q9BUY7 163 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 PCDHGA11Q9Y5H2 935 aa16.75■□□□□ 0.27
CLDN4-201ENST00000340958 PRAMEF4O60810 478 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 SEC22BO75396 215 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 ERGP11308 486 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 CDH1P12830 882 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 PKLRP30613 574 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 DHPSP49366 369 aaPredicted RBP16.74■□□□□ 0.27
CLDN4-201ENST00000340958 LAPTM5Q13571 262 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 CYLC2Q14093 348 aaPredicted RBP16.74■□□□□ 0.27
CLDN4-201ENST00000340958 SLBPQ14493 270 aaKnown RBP eCLIP16.74■□□□□ 0.27
CLDN4-201ENST00000340958 GSTA3Q16772 222 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 C6orf136Q5SQH8 315 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 PRAMEF9Q5VWM5 478 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 ATG9BQ674R7 924 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 NXPE4Q6UWF7 544 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms