RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 ERVK-11Q9UQG0 969 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 LINC00854A0A1B0GVQ3 168 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 C5orf58C9J3I9 102 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 LOC110117498-PIK3R3F6TDL0 507 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 TAF4O00268 1085 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 IGSF6O95976 241 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 ABCB1P08183 1280 aaPredicted RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 ITGA2P17301 1181 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 RRM2P31350 389 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 RECQLP46063 649 aaPredicted RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 GP2P55259 537 aaKnown RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 SPIBQ01892 262 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 SLC13A2Q13183 592 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 VMACQ2NL98 169 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 C11orf65Q8NCR3 313 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 PDLIM5Q96HC4 596 aaKnown RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 HSH2DQ96JZ2 352 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 SP140LQ9H930 580 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 SLC28A3Q9HAS3 691 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 DNAJC11Q9NVH1 559 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 ANKMY1Q9P2S6 941 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 ZNF221Q9UK13 617 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 TMCC3Q9ULS5 477 aa9.19□□□□□ -0.94
TRERF1-201ENST00000340840 CAB39Q9Y376 341 aaPredicted RBP9.19□□□□□ -0.94
TRERF1-201ENST00000340840 ZFC3H1O60293 1989 aaKnown RBP9.18□□□□□ -0.94
TRERF1-201ENST00000340840 TBKBP1A7MCY6 615 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 PRSS23O95084 383 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 OAZ2O95190 189 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 SERPINA4P29622 427 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 KDELR2P33947 212 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 SPAM1P38567 509 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 RPP38P78345 283 aaKnown RBP9.18□□□□□ -0.94
TRERF1-201ENST00000340840 ZNF45Q02386 682 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 TLE2Q04725 743 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 DUOXA1Q1HG43 343 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 CTSL3PQ5NE16 218 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 SLC24A5Q71RS6 500 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 OTOP2Q7RTS6 562 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 B3GNT8Q7Z7M8 397 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 SNX29P2Q8IUI4 249 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 OR6K2Q8NGY2 324 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 RHOXF1Q8NHV9 184 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 PIK3R3Q92569 461 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 FOPNLQ96NB1 174 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 DEPDC7Q96QD5 511 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 TRIB3Q96RU7 358 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 FER1L6Q2WGJ9 1857 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 TBL1XO60907 577 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 TRBC1P01850 177 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 PABPC1P11940 636 aaKnown RBP9.18□□□□□ -0.94
TRERF1-201ENST00000340840 CD9P21926 228 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 FUT4P22083 530 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 SOAT1P35610 550 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 CRATP43155 626 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 DMPKQ09013 629 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 LRRC74AQ0VAA2 488 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 CAMK2GQ13555 558 aaPredicted RBP9.18□□□□□ -0.94
TRERF1-201ENST00000340840 MED22Q15528 200 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 PROX2Q3B8N5 592 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 ADPRMQ3LIE5 342 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 GPR33Q49SQ1 333 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 ANXA8L1Q5VT79 327 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 CPZQ66K79 652 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 NEK5Q6P3R8 708 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 RBM23Q86U06 439 aaKnown RBP9.18□□□□□ -0.94
TRERF1-201ENST00000340840 SERINC5Q86VE9 423 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 CADM3Q8N126 398 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 CLMPQ9H6B4 373 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 CLN6Q9NWW5 311 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 TMEM161AQ9NX61 479 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 ACTL7AQ9Y615 435 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 CENPXA8MT69 81 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 PSMD11O00231 422 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 RFPL2O75678 378 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 PFKLP17858 780 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 PTX3P26022 381 aaPredicted RBP9.18□□□□□ -0.94
TRERF1-201ENST00000340840 COPZ1P61923 177 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 YBX1P67809 324 aaKnown RBP9.18□□□□□ -0.94
TRERF1-201ENST00000340840 NPRL3Q12980 569 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 C1DQ13901 141 aaKnown RBP9.18□□□□□ -0.94
TRERF1-201ENST00000340840 MAD2L1BPQ15013 274 aaPredicted RBP9.18□□□□□ -0.94
TRERF1-201ENST00000340840 KCNA10Q16322 511 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 CPTPQ5TA50 214 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 CMTM7Q96FZ5 175 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 EBPLQ9BY08 206 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 LTB4R2Q9NPC1 389 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 ACOT13Q9NPJ3 140 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 ZNF225Q9UK10 706 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 VPS4AQ9UN37 437 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 CFL2Q9Y281 166 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 TESMINQ9Y4I5 508 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 PCDHB7Q9Y5E2 793 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 PCDHGA10Q9Y5H3 936 aa9.18□□□□□ -0.94
TRERF1-201ENST00000340840 ZNF646O15015 1829 aaPredicted RBP9.18□□□□□ -0.94
TRERF1-201ENST00000340840 OR7A17O14581 309 aa9.17□□□□□ -0.94
TRERF1-201ENST00000340840 UPK1BO75841 260 aa9.17□□□□□ -0.94
TRERF1-201ENST00000340840 EOMESO95936 686 aa9.17□□□□□ -0.94
TRERF1-201ENST00000340840 LCKP06239 509 aa9.17□□□□□ -0.94
TRERF1-201ENST00000340840 ASGR1P07306 291 aa9.17□□□□□ -0.94
TRERF1-201ENST00000340840 ANXA8P13928 327 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms