RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 NAPEPLDQ6IQ20 393 aa14.96□□□□□ -0.01
LIMK2-203ENST00000340552 TCTE3Q8IZS6 198 aa14.96□□□□□ -0.01
LIMK2-203ENST00000340552 CYP4Z2PQ8N1L4 340 aa14.96□□□□□ -0.01
LIMK2-203ENST00000340552 PTGR2Q8N8N7 351 aaPredicted RBP14.96□□□□□ -0.01
LIMK2-203ENST00000340552 LILRB1Q8NHL6 650 aaPredicted RBP14.96□□□□□ -0.01
LIMK2-203ENST00000340552 SH3RF2Q8TEC5 729 aa14.96□□□□□ -0.01
LIMK2-203ENST00000340552 PTERQ96BW5 349 aa14.96□□□□□ -0.01
LIMK2-203ENST00000340552 CEP19Q96LK0 163 aa14.96□□□□□ -0.01
LIMK2-203ENST00000340552 TM9SF2Q99805 663 aa14.96□□□□□ -0.01
LIMK2-203ENST00000340552 CHCHD6Q9BRQ6 235 aa14.96□□□□□ -0.01
LIMK2-203ENST00000340552 WDCPQ9H6R7 721 aa14.96□□□□□ -0.01
LIMK2-203ENST00000340552 PCP4L1A6NKN8 68 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 E5RI56 91 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 PITPNM1O00562 1244 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 OR2B3O76000 313 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 ADORA3P0DMS8 318 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 ZNF250P15622 560 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 ZNF37AP17032 561 aaPredicted RBP14.96□□□□□ -0.02
LIMK2-203ENST00000340552 ZNF30P17039 623 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 AZGP1P25311 298 aaKnown RBP14.96□□□□□ -0.02
LIMK2-203ENST00000340552 CSTF2P33240 577 aaKnown RBP eCLIP14.96□□□□□ -0.028e-7■■■□□ 17.6
LIMK2-203ENST00000340552 KEAP1Q14145 624 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 PIK3R6Q5UE93 754 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 LAMTOR1Q6IAA8 161 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 PAMR1Q6UXH9 720 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 TAC4Q86UU9 113 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 CCDC71Q8IV32 467 aaPredicted RBP14.96□□□□□ -0.02
LIMK2-203ENST00000340552 SCN4BQ8IWT1 228 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 GORASP2Q9H8Y8 452 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 PAK6Q9NQU5 681 aaPredicted RBP14.96□□□□□ -0.02
LIMK2-203ENST00000340552 B3GNT2Q9NY97 397 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 NEUROG3Q9Y4Z2 214 aa14.96□□□□□ -0.02
LIMK2-203ENST00000340552 DFFAO00273 331 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 ANKRD28O15084 1053 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 GSTA4O15217 222 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 TLL1O43897 1013 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 MRPS14O60783 128 aaKnown RBP14.95□□□□□ -0.02
LIMK2-203ENST00000340552 WBP4O75554 376 aaKnown RBP14.95□□□□□ -0.02
LIMK2-203ENST00000340552 PRR35P0CG20 571 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 CXCR3P49682 368 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 LIMK1P53667 647 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 HYAL2Q12891 473 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 SEMA3BQ13214 749 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 CREB3L2Q70SY1 520 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 DET1Q7L5Y6 550 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 NPWQ8N729 165 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 SPATA22Q8NHS9 363 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 TRMT61AQ96FX7 289 aaKnown RBP14.95□□□□□ -0.02
LIMK2-203ENST00000340552 MYOCQ99972 504 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 TKTL2Q9H0I9 626 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 LIN7BQ9HAP6 207 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 SLC23A1Q9UHI7 598 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 LRFN2Q9ULH4 789 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 HSPE1-MOB4S4R3N1 261 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 SCN5AQ14524 2016 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 TNFRSF10BO14763 440 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 CFL1P23528 166 aaKnown RBP14.95□□□□□ -0.02
LIMK2-203ENST00000340552 TPI1P60174 286 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 HABP4Q5JVS0 413 aaKnown RBP14.95□□□□□ -0.02
LIMK2-203ENST00000340552 SCIMPQ6UWF3 145 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 SPATA19Q7Z5L4 167 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 CASD1Q96PB1 797 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 BRINP2Q9C0B6 783 aa14.95□□□□□ -0.02
LIMK2-203ENST00000340552 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.95□□□□□ -0.02
LIMK2-203ENST00000340552 A0A1W2PQ09 198 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 SYN3O14994 580 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 PRLP01236 227 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 ERCC2P18074 760 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 MYL9P24844 172 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 DAPP51397 102 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 ATN1P54259 1190 aaPredicted RBP14.94□□□□□ -0.02
LIMK2-203ENST00000340552 MFSD13AQ14CX5 517 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 TCTN1Q2MV58 587 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 TMEM65Q6PI78 240 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 HIPK1Q86Z02 1210 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 ZNF784Q8NCA9 323 aaPredicted RBP14.94□□□□□ -0.02
LIMK2-203ENST00000340552 OR2T12Q8NG77 320 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 PROKR1Q8TCW9 393 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 IPCEF1Q8WWN9 437 aaPredicted RBP14.94□□□□□ -0.02
LIMK2-203ENST00000340552 DNASE1L2Q92874 299 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 RNF34Q969K3 372 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 SCLYQ96I15 445 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 CCDC115Q96NT0 180 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 MCCC1Q96RQ3 725 aaPredicted RBP14.94□□□□□ -0.02
LIMK2-203ENST00000340552 TRIM62Q9BVG3 475 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 RNF208Q9H0X6 261 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 TRMT6Q9UJA5 497 aaKnown RBP14.94□□□□□ -0.02
LIMK2-203ENST00000340552 FAM234BA2RU67 622 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 NPPAP01160 153 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 NFKB2Q00653 900 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 TRIM60Q495X7 471 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 FAM171A1Q5VUB5 890 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 LETMD1Q6P1Q0 360 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 DPP10Q8N608 796 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 ST13P5Q8NFI4 369 aaPredicted RBP14.94□□□□□ -0.02
LIMK2-203ENST00000340552 OR10Q1Q8NGQ4 319 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 APH1BQ8WW43 257 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 FCGR1BQ92637 280 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 HCSTQ9UBK5 93 aa14.94□□□□□ -0.02
LIMK2-203ENST00000340552 HSPB11Q9Y547 144 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms