RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 OR2T29Q8NH02 315 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 MAPK15Q8TD08 544 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 GTF3C2Q8WUA4 911 aaPredicted RBP8.49□□□□□ -1.05
RTN3-202ENST00000339997 C7orf43Q8WVR3 580 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 EXO5Q9H790 373 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 DAPL1A0PJW8 107 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 WWP2O00308 870 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 SOCS2O14508 198 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 SLC22A1O15245 554 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 DFNA5O60443 496 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 JUNP05412 331 aaKnown RBP8.49□□□□□ -1.05
RTN3-202ENST00000339997 C8orf89P0DMQ9 161 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 T-ENOLP0DO92 83 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 AKT2P31751 481 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 ZNF81P51508 661 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 KCNQ1P51787 676 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 CRYBB1P53674 252 aaPredicted RBP8.49□□□□□ -1.05
RTN3-202ENST00000339997 MOGQ16653 247 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 TMEM209Q96SK2 561 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 SLC29A1Q99808 456 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 TP63Q9H3D4 680 aaPredicted RBP8.49□□□□□ -1.05
RTN3-202ENST00000339997 CD320Q9NPF0 282 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 IGSF9Q9P2J2 1179 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 MAU2Q9Y6X3 613 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 ARHGAP23Q9P227 1491 aa8.49□□□□□ -1.05
RTN3-202ENST00000339997 SOWAHBA6NEL2 793 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 SLC7A4O43246 635 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 CHP2O43745 196 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 CLDN11O75508 207 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 PABPC1LQ4VXU2 614 aaKnown RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 TNFAIP8L3Q5GJ75 292 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 SLC8B1Q6J4K2 584 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 TCEANCQ8N8B7 351 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 ARRDC4Q8NCT1 418 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 RRAGCQ9HB90 399 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 SMOXQ9NWM0 555 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 THUMPD1Q9NXG2 353 aaKnown RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 SIRPGQ9P1W8 387 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 RNF11Q9Y3C5 154 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 LAMA4Q16363 1823 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 A0A0J9YVX5 310 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 SLC31A1O15431 190 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 CNTN5O94779 1100 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 SPAM1P38567 509 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 CDKL1Q00532 357 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 RGS1Q08116 209 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 SCGB2B2Q4G0G5 96 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 NANOGP8Q6NSW7 305 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 HMBOX1Q6NT76 420 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 LYSMD3Q7Z3D4 306 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 HS3ST5Q8IZT8 346 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 SLC15A4Q8N697 577 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 KRTCAP2Q8N6L1 136 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 OR6C4Q8NGE1 309 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 GRHL3Q8TE85 626 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 C5orf34Q96MH7 638 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 HNRNPABQ99729 332 aaKnown RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 CCDC106Q9BWC9 280 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 OR51B5Q9H339 312 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 NANOGQ9H9S0 305 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 ASAH2Q9NR71 780 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 CNTN3Q9P232 1028 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 RCOR3Q9P2K3 495 aaPredicted RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 DNAJB4Q9UDY4 337 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 RNF6Q9Y252 685 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 PCDHB3Q9Y5E6 796 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 MAFBQ9Y5Q3 323 aaPredicted RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 XIRP2A4UGR9 3374 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 ISPDA4D126 451 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 ARL5CA6NH57 179 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 LRRC72A6NJI9 287 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 OR1I1O60431 355 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 CREG1O75629 220 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 PRH1P02810 166 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 BCHEP06276 602 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 TM4SF1P30408 202 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 CBX5P45973 191 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 XKP51811 444 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 SKP1P63208 163 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 CACNG1Q06432 222 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 SP140Q13342 867 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 CBX2Q14781 532 aaPredicted RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 GPR68Q15743 365 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 INTS6LQ5JSJ4 861 aaKnown RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 SIRPB2Q5JXA9 342 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 KIAA0930Q6ICG6 404 aaPredicted RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 SVOPLQ8N434 492 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 FIBCD1Q8N539 461 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 GRPEL2Q8TAA5 225 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 DPH2Q9BQC3 489 aaPredicted RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 CDADC1Q9BWV3 514 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 ZNF717Q9BY31 904 aaPredicted RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 B3GNT4Q9C0J1 378 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 C3orf14Q9HBI5 128 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 ACTR3BQ9P1U1 418 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 MAGED1Q9Y5V3 778 aaPredicted RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 FER1L4A9Z1Z3 1794 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 A0A1W2PRB8 838 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 PRORSD1PA6NEY8 169 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms