RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TECRLQ5HYJ1 363 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 ZC3H12BQ5HYM0 836 aaKnown RBP11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 C3orf38Q5JPI3 329 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 TMEM164Q5U3C3 297 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 KIAA1614Q5VZ46 1190 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 ICE2Q659A1 982 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 LCTLQ6UWM7 567 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 SH2D5Q6ZV89 423 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 TRABD2AQ86V40 505 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 THOC6Q86W42 341 aaKnown RBP11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 C17orf64Q86WR6 236 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 FAM129CQ86XR2 697 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 MARCH9Q86YJ5 346 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 SRRM1Q8IYB3 904 aaKnown RBP11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 D2HGDHQ8N465 521 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 PDPRQ8NCN5 879 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 N4BP2L2Q92802 583 aaPredicted RBP11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 PYCR2Q96C36 320 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 PKNOX2Q96KN3 472 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 PPM1MQ96MI6 270 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 TAAR9Q96RI9 348 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 SMC6Q96SB8 1091 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 DPH7Q9BTV6 452 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 CD244Q9BZW8 370 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 CHRNA10Q9GZZ6 450 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 KLHL25Q9H0H3 589 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 FBXO8Q9NRD0 319 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 TMEM184CQ9NVA4 438 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 SLC39A1Q9NY26 324 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 TMEM216Q9P0N5 145 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 CPSF2Q9P2I0 782 aaKnown RBP11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 ANKMY1Q9P2S6 941 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 SERTAD3Q9UJW9 196 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 ANGPTL2Q9UKU9 493 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 WASF3Q9UPY6 502 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 BTRCQ9Y297 605 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 PCDHGA8Q9Y5G5 932 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 KCNE2Q9Y6J6 123 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 AK5Q9Y6K8 562 aa11.47□□□□□ -0.57
SPTLC1-202ENST00000337841 RP1P56715 2156 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 POLR1CO15160 346 aaPredicted RBP11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 TAPBPO15533 448 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 WDR47O94967 919 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 TNFSF15O95150 251 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 FGF3P11487 239 aaPredicted RBP11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 CCL4P13236 92 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 MTHFD2P13995 350 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 SPINK2P20155 84 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 MAGP20916 626 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 PSMB5P28074 263 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 MLLT3P42568 568 aaPredicted RBP11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 MAPK10P53779 464 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 SHC2P98077 582 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 FOXM1Q08050 763 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 IL11RAQ14626 422 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 PFKFB4Q16877 469 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 CCDC153Q494R4 210 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 C16orf46Q6P387 395 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 FAM20CQ8IXL6 584 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 KLHDC8AQ8IYD2 350 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 C4orf33Q8N1A6 199 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 TBC1D19Q8N5T2 526 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 C19orf47Q8N9M1 422 aaKnown RBP11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 PGM2Q96G03 612 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 ASPSCR1Q9BZE9 553 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 FANCEQ9HB96 536 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 DNAJC11Q9NVH1 559 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 OCIAD1Q9NX40 245 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 XPR1Q9UBH6 696 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 PISDQ9UG56 409 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 METRNQ9UJH8 293 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 PLCL2Q9UPR0 1127 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 SATB2Q9UPW6 733 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 SLC22A14Q9Y267 594 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 KLHL20Q9Y2M5 609 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 ANGPTL3Q9Y5C1 460 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 KLK4Q9Y5K2 254 aa11.46□□□□□ -0.57
SPTLC1-202ENST00000337841 UQCRHLA0A096LP55 91 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 H7BY64 318 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 CLGNO14967 610 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 KLK8O60259 260 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 CCNT2O60583 730 aaKnown RBP11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 UQCRHP07919 91 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 FOLR1P15328 257 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 GNAZP19086 355 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 GRK3P35626 688 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 GDF5P43026 501 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 SLC6A12P48065 614 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 HSPA7P48741 367 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 CCR8P51685 355 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 RAB15P59190 212 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 GABREP78334 506 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 RELAQ04206 551 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 CAMK2BQ13554 666 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 RTP5Q14D33 572 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 SETDB1Q15047 1291 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 ZXDCQ2QGD7 858 aaPredicted RBP11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 C18orf21Q32NC0 220 aaPredicted RBP11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 DCAF12Q5T6F0 453 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 METTL2BQ6P1Q9 378 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms