RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 TNPO3Q9Y5L0 923 aaKnown RBP13.38□□□□□ -0.27
SYNE3-201ENST00000334258 ACTL7AQ9Y615 435 aa13.38□□□□□ -0.27
SYNE3-201ENST00000334258 TTC3P53804 2025 aa13.38□□□□□ -0.27
SYNE3-201ENST00000334258 CENPBD1B2RD01 187 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 KLK8O60259 260 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 LRATO95237 230 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 MC4RP32245 332 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 SLC15A1P46059 708 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 MAD2L1Q13257 205 aaPredicted RBP13.37□□□□□ -0.27
SYNE3-201ENST00000334258 KDM4DQ6B0I6 523 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 Q6ZPB1 254 aaPredicted RBP13.37□□□□□ -0.27
SYNE3-201ENST00000334258 GALNT12Q8IXK2 581 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 KIAA1958Q8N8K9 716 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 IL17RDQ8NFM7 739 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 PEX13Q92968 403 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 TPD52L3Q96J77 140 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 TSSK3Q96PN8 268 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 TTYH2Q9BSA4 534 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 FKBPLQ9UIM3 349 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 ZNF490Q9ULM2 529 aaPredicted RBP13.37□□□□□ -0.27
SYNE3-201ENST00000334258 SATB2Q9UPW6 733 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 PEX16Q9Y5Y5 336 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 EVPLLA8MZ36 301 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 OR7A17O14581 309 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 KMOO15229 486 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 CA12O43570 354 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 TSPAN12O95859 305 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 TBX18O95935 607 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 B3GALT4O96024 378 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 FPR1P21462 350 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 SOX6P35712 828 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 KIAA0040Q15053 153 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 MS4A13Q5J8X5 152 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 ARMC4Q5T2S8 1044 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 ATG9BQ674R7 924 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 TCAIMQ8N3R3 496 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 STX19Q8N4C7 294 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 GLB1L3Q8NCI6 653 aaPredicted RBP13.37□□□□□ -0.27
SYNE3-201ENST00000334258 CD200R1Q8TD46 325 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 IGSF8Q969P0 613 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 COQ7Q99807 217 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 RTP3Q9BQQ7 232 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 INPP5KQ9BT40 448 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 CCDC177Q9NQR7 707 aaPredicted RBP13.37□□□□□ -0.27
SYNE3-201ENST00000334258 ABI2Q9NYB9 513 aaPredicted RBP13.37□□□□□ -0.27
SYNE3-201ENST00000334258 NDRG4Q9ULP0 352 aaKnown RBP13.37□□□□□ -0.27
SYNE3-201ENST00000334258 A0A0U1RQS6 177 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 GOLGA8CPA6NN73 597 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 ARHGAP33O14559 1287 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 OR4Q2P0C623 313 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 NRIP1P48552 1158 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 IL10RBQ08334 325 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 NPRL3Q12980 569 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 TP53BP2Q13625 1128 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 BCL7AQ4VC05 210 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 SLX4IPQ5VYV7 408 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 FBXL22Q6P050 247 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 SNX20Q7Z614 316 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 LPCAT1Q8NF37 534 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 FCGR1BQ92637 280 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 KCNC2Q96PR1 638 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 ACBD6Q9BR61 282 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 TM9SF3Q9HD45 589 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 NLE1Q9NVX2 485 aaPredicted RBP13.37□□□□□ -0.27
SYNE3-201ENST00000334258 VPS4AQ9UN37 437 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 VPS9D1Q9Y2B5 631 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 AP3M1Q9Y2T2 418 aa13.37□□□□□ -0.27
SYNE3-201ENST00000334258 CCRL2O00421 344 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 AP3D1O14617 1153 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 DSCR3O14972 297 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 STX7O15400 261 aaKnown RBP13.36□□□□□ -0.27
SYNE3-201ENST00000334258 GPR39O43194 453 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 TLL1O43897 1013 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 WBP4O75554 376 aaKnown RBP13.36□□□□□ -0.27
SYNE3-201ENST00000334258 FABP3P05413 133 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 BMP1P13497 986 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 MFSD14CQ5VZR4 134 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 OVOS1Q6IE37 1185 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 OR10T2Q8NGX3 314 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 PAQR5Q9NXK6 330 aaPredicted RBP13.36□□□□□ -0.27
SYNE3-201ENST00000334258 WWOXQ9NZC7 414 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 NUDT4Q9NZJ9 180 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 TMEM88BA6NKF7 163 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 A8MX80 341 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 FAM220BPB1ANY3 271 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 FFAR2O15552 330 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 ERN1O75460 977 aaKnown RBP13.36□□□□□ -0.27
SYNE3-201ENST00000334258 ABCB1P08183 1280 aaPredicted RBP13.36□□□□□ -0.27
SYNE3-201ENST00000334258 POLR2EP19388 210 aaKnown RBP13.36□□□□□ -0.27
SYNE3-201ENST00000334258 UGT2B10P36537 528 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 TTPAP49638 278 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 PRKCDQ05655 676 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 EIF4EBP2Q13542 120 aaPredicted RBP13.36□□□□□ -0.27
SYNE3-201ENST00000334258 DMC1Q14565 340 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 TRIM60Q495X7 471 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 SNAP47Q5SQN1 464 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 NXNL2Q5VZ03 156 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 OR6F1Q8NGZ6 308 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 MYDGFQ969H8 173 aa13.36□□□□□ -0.27
SYNE3-201ENST00000334258 BBS2Q9BXC9 721 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms