RNA–Protein interactions for RNA: ENST00000333843.8

MBD3L3-201, Transcript of methyl-CpG binding domain protein 3 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3L3, Length 775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3-201ENST00000333843 ICE2Q659A1 982 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 CYHR1Q6ZMK1 362 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 PRICKLE2Q7Z3G6 844 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 HPS6Q86YV9 775 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 FAM20CQ8IXL6 584 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 CPNE9Q8IYJ1 553 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 ZNF480Q8WV37 535 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 PKP4Q99569 1192 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 ZFYVE21Q9BQ24 234 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 WDR83Q9BRX9 315 aaKnown RBP13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 TRIM51Q9BSJ1 452 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 PHACTR1Q9C0D0 580 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 PLAC1Q9HBJ0 212 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 SLC6A20Q9NP91 592 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 MRPS30Q9NP92 439 aaKnown RBP13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 CUTCQ9NTM9 273 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 IFT80Q9P2H3 777 aaPredicted RBP13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 NXT1Q9UKK6 140 aaKnown RBP13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 CHMP2BQ9UQN3 213 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 KLHL20Q9Y2M5 609 aa13.1□□□□□ -0.31
MBD3L3-201ENST00000333843 KRT87PA6NCN2 255 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 EFCAB8A8MWE9 144 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 BANF1O75531 89 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 CTSBP07858 339 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 HRH2P25021 359 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 GABRB3P28472 473 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 CASRP41180 1078 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 PRDX1Q06830 199 aaKnown RBP13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 KLRB1Q12918 225 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 FASTKQ14296 549 aaKnown RBP13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 SSPNQ14714 243 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 TEDDM1Q5T9Z0 273 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 NUP210LQ5VU65 1888 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 ZNF425Q6IV72 752 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 FAM45BPQ6NSW5 357 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 PRMT9Q6P2P2 845 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 UBE2R2Q712K3 238 aaPredicted RBP13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 PIWIL4Q7Z3Z4 852 aaKnown RBP13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 MAATS1Q7Z4T9 603 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 MRGPREQ86SM8 312 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 SLC26A11Q86WA9 606 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 PAQR7Q86WK9 346 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 IGDCC3Q8IVU1 814 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 LRRC56Q8IYG6 542 aaPredicted RBP13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 MYO1HQ8N1T3 1032 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 FAM45AQ8TCE6 357 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 MVB12AQ96EY5 273 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 PLCD4Q9BRC7 762 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 DPH7Q9BTV6 452 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 PCBD2Q9H0N5 130 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 ING2Q9H160 280 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 MLXIPLQ9NP71 852 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 ACSS2Q9NR19 701 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 NSMCE4AQ9NXX6 385 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 TSR3Q9UJK0 312 aaKnown RBP13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 TLK1Q9UKI8 766 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 G3BP2Q9UN86 482 aaKnown RBP13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 TP53TG5Q9Y2B4 290 aa13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.09□□□□□ -0.31
MBD3L3-201ENST00000333843 EIF3HO15372 352 aaKnown RBP eCLIP13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 KLHL41O60662 606 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 AHSGP02765 367 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 F7P08709 466 aaPredicted RBP13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 ITGAXP20702 1163 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 FDXRP22570 491 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 CCND1P24385 295 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 MCM3P25205 808 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 IMPA1P29218 277 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 RPL21P46778 160 aaKnown RBP13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 CARSP49589 748 aaKnown RBP13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 AP1S2P56377 157 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 ETF1P62495 437 aaKnown RBP13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 NFKB2Q00653 900 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 TIAL1Q01085 375 aaKnown RBP eCLIP13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 CALCOCO2Q13137 446 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 MUM1Q2TAK8 710 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 C1orf189Q5VU69 101 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 CPZQ66K79 652 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 TTLL10Q6ZVT0 673 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 PALM2Q8IXS6 379 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 SPATA4Q8NEY3 305 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 MCOLN3Q8TDD5 553 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 PTERQ96BW5 349 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 CCDC138Q96M89 665 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 KRT12Q99456 494 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 NDNQ99608 321 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 TRIM55Q9BYV6 548 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 CCDC177Q9NQR7 707 aaPredicted RBP13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 WHRNQ9P202 907 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 ZFATQ9P243 1243 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 TAC3Q9UHF0 121 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 FLNCQ14315 2725 aa13.08□□□□□ -0.32
MBD3L3-201ENST00000333843 SPENQ96T58 3664 aaKnown RBP13.07□□□□□ -0.32
MBD3L3-201ENST00000333843 IGKV1-8A0A0C4DH67 115 aa13.07□□□□□ -0.32
MBD3L3-201ENST00000333843 ARGFXA6NJG6 315 aa13.07□□□□□ -0.32
MBD3L3-201ENST00000333843 TXNDC9O14530 226 aa13.07□□□□□ -0.32
MBD3L3-201ENST00000333843 PRPF4O43172 522 aaKnown RBP eCLIP13.07□□□□□ -0.32
MBD3L3-201ENST00000333843 TSPAN12O95859 305 aa13.07□□□□□ -0.32
MBD3L3-201ENST00000333843 SYF2O95926 243 aaKnown RBP13.07□□□□□ -0.32
MBD3L3-201ENST00000333843 ENO2P09104 434 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms