RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 AASDHPPTQ9NRN7 309 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 SNX6Q9UNH7 406 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 IGLV3-16A0A075B6K0 115 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 PCMT1P22061 227 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 FMO3P31513 532 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 DAPP51397 102 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 GP2P55259 537 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 WNT3P56703 355 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 PFN3P60673 137 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 CDK5R2Q13319 367 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 DDX39BQ13838 428 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 UGT8Q16880 541 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 CCSMST1Q4G0I0 132 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 FRG2Q64ET8 278 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 C22orf39Q6P5X5 142 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 GALNT18Q6P9A2 607 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 CROCCP3Q8IVE0 287 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 REXO5Q96IC2 774 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 PLEKHA8Q96JA3 519 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 CNDP2Q96KP4 475 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 LMLNQ96KR4 655 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 CCDC138Q96M89 665 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 FRG2BQ96QU4 278 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 C3orf18Q9UK00 162 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 LSM7Q9UK45 103 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 PSME2Q9UL46 239 aa13.03□□□□□ -0.32
TUBA1B-201ENST00000332858 OR2AG2A6NM03 316 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 MYO1GB0I1T2 1018 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 SCN2BO60939 215 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 BCAS1O75363 584 aaPredicted RBP13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 HIST1H2AGP0C0S8 130 aaPredicted RBP13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 OR56A5P0C7T3 313 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 CBSLP0DN79 551 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 HIST1H2ADP20671 130 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 CBSP35520 551 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 MAPK8P45983 427 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 SPINT3P49223 89 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 SNRPD1P62314 119 aaKnown RBP13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 VLDLRP98155 873 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 GBX1Q14549 363 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 SMN1Q16637 294 aaKnown RBP13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 MPPE1Q53F39 396 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 METTL2BQ6P1Q9 378 aaKnown RBP13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 TMEM25Q86YD3 366 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 CMTM7Q96FZ5 175 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 HIST1H2AHQ96KK5 128 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 HHIPQ96QV1 700 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 MCCC1Q96RQ3 725 aaPredicted RBP13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 HIST1H2AJQ99878 128 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 H2AFJQ9BTM1 129 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 TMEM9Q9P0T7 183 aa13.02□□□□□ -0.32
TUBA1B-201ENST00000332858 WNT9AO14904 365 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 SGTAO43765 313 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 KCNK5O95279 499 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 BCL10O95999 233 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 URODP06132 367 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 NUDT7P0C024 238 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 ATP1B2P14415 290 aaPredicted RBP13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 ENGP17813 658 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 C21orf59P57076 290 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 IL5RAQ01344 420 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 ABHD18Q0P651 414 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 ZNF621Q6ZSS3 439 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 USP45Q70EL2 814 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 LRRC70Q7Z2Q7 622 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 BTLAQ7Z6A9 289 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 GALNT13Q8IUC8 556 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 L3MBTL4Q8NA19 623 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 TESCQ96BS2 214 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 PANX1Q96RD7 426 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 SLC46A2Q9BY10 475 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 GMEB1Q9Y692 573 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 GFYI3L273 518 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 LEFTY2O00292 366 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 CLIC1O00299 241 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 BCKDKO14874 412 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 NUAK1O60285 661 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 CPSF4O95639 269 aaKnown RBP13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 PRPS2P11908 318 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 CD6P30203 668 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 MAGEA2P43356 314 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 KIR3DL1P43629 444 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 CLK3P49761 638 aaKnown RBP13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 DEFB103AP81534 67 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 EMX1Q04741 257 aaPredicted RBP13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 NOGQ13253 232 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 LMNTD1Q8N9Z9 388 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 SMYD1Q8NB12 490 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 FAM210AQ96ND0 272 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 ZNF558Q96NG5 402 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 NODALQ96S42 347 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 RIBC2Q9H4K1 309 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 MTG2Q9H4K7 406 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 MAGIXQ9H6Y5 334 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 RMND5AQ9H871 391 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 BAG5Q9UL15 447 aa13.02□□□□□ -0.33
TUBA1B-201ENST00000332858 FPGTO14772 594 aa13.01□□□□□ -0.33
TUBA1B-201ENST00000332858 TGM5O43548 720 aa13.01□□□□□ -0.33
TUBA1B-201ENST00000332858 NOL3O60936 208 aaKnown RBP13.01□□□□□ -0.33
TUBA1B-201ENST00000332858 ETHE1O95571 254 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms