RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SIPA1Q96FS4 1042 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 NODALQ96S42 347 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 CRNNQ9UBG3 495 aaPredicted RBP12.67□□□□□ -0.38
VSTM4-202ENST00000332853 STRCQ7RTU9 1775 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 A0A0J9YVX5 310 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 AQP12BA6NM10 295 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 B4DGG1 531 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 ABLIM1O14639 778 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 JUNP05412 331 aaKnown RBP12.67□□□□□ -0.38
VSTM4-202ENST00000332853 KIAA0319Q5VV43 1072 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 C11orf88Q6PI97 169 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 SMARCD3Q6STE5 483 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 AQP12AQ8IXF9 295 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 MARCH7Q9H992 704 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 AMBNQ9NP70 447 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 ARAP2Q8WZ64 1704 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 ERI3O43414 337 aaKnown RBP12.67□□□□□ -0.38
VSTM4-202ENST00000332853 TSPAN6O43657 245 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 B3GALT2O43825 422 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 EBLN1P0CF75 366 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 TPP2P29144 1249 aaPredicted RBP12.67□□□□□ -0.38
VSTM4-202ENST00000332853 SRP54P61011 504 aaKnown RBP12.67□□□□□ -0.38
VSTM4-202ENST00000332853 SIX5Q8N196 739 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 ATP6V1C2Q8NEY4 427 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 MTMR10Q9NXD2 777 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 AURKAO14965 403 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 CLK3P49761 638 aaKnown RBP12.67□□□□□ -0.38
VSTM4-202ENST00000332853 DUOXA1Q1HG43 343 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 SPRED3Q2MJR0 410 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 MZT2AQ6P582 158 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 OR4E2Q8NGC2 313 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 RANBP9Q96S59 729 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 BOCQ9BWV1 1114 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 TRMUO75648 421 aaKnown RBP12.67□□□□□ -0.38
VSTM4-202ENST00000332853 NR2F6P10588 404 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 GALK1P51570 392 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 TAS2R50P59544 299 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 CEP68Q76N32 757 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 NFKBIDQ8NI38 313 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 BIRC7Q96CA5 298 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 CXorf21Q9HAI6 301 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 AKAP7Q9P0M2 348 aaPredicted RBP12.67□□□□□ -0.38
VSTM4-202ENST00000332853 CDK5RAP2Q96SN8 1893 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 RHPN2P1A8MT19 583 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 TMCC2O75069 709 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 C8orf89P0DMQ9 161 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 SPIN4Q56A73 249 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 CXorf57Q6NSI4 855 aaKnown RBP12.66□□□□□ -0.38
VSTM4-202ENST00000332853 MCFD2Q8NI22 146 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 GAL3ST4Q96RP7 486 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 POPDC3Q9HBV1 291 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 ERN1O75460 977 aaKnown RBP12.66□□□□□ -0.38
VSTM4-202ENST00000332853 PRKACGP22612 351 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 TARDBPQ13148 414 aaKnown RBP eCLIP12.66□□□□□ -0.38
VSTM4-202ENST00000332853 PTGR1Q14914 329 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 CYP27C1Q4G0S4 372 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 NCEH1Q6PIU2 408 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 FAM180AQ6UWF9 173 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 RAD9AQ99638 391 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 TMEM27Q9HBJ8 222 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 RGS17Q9UGC6 210 aaPredicted RBP12.66□□□□□ -0.38
VSTM4-202ENST00000332853 BTBD3Q9Y2F9 522 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 PCDHGB3Q9Y5G1 929 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 PLK4O00444 970 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 SOCS5O75159 536 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 H6PDO95479 791 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 PDYNP01213 254 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 BCHEP06276 602 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 BTN3A2P78410 334 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 NDUFA9Q16795 377 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 RNASE12Q5GAN4 147 aaKnown RBP12.66□□□□□ -0.38
VSTM4-202ENST00000332853 PGAP3Q96FM1 320 aaPredicted RBP12.66□□□□□ -0.38
VSTM4-202ENST00000332853 CHCHD6Q9BRQ6 235 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 POLMQ9NP87 494 aaPredicted RBP12.66□□□□□ -0.38
VSTM4-202ENST00000332853 ITM2CQ9NQX7 267 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 NTHL1P78549 312 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 EMX2Q04743 252 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 DPY19L1Q2PZI1 675 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 AMZ1Q400G9 498 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 JPH3Q8WXH2 748 aaPredicted RBP12.66□□□□□ -0.38
VSTM4-202ENST00000332853 RBM18Q96H35 190 aaKnown RBP12.66□□□□□ -0.38
VSTM4-202ENST00000332853 CASD1Q96PB1 797 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 ZCCHC3Q9NUD5 404 aaKnown RBP12.66□□□□□ -0.38
VSTM4-202ENST00000332853 MRPL39Q9NYK5 338 aaKnown RBP12.66□□□□□ -0.38
VSTM4-202ENST00000332853 HEBP2Q9Y5Z4 205 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 PHIPQ8WWQ0 1821 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 IL7RP16871 459 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 ZNF805Q5CZA5 627 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 FAAH2Q6GMR7 532 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 NUDT13Q86X67 352 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 TMEM25Q86YD3 366 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 RGMAQ96B86 450 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 EFCAB11Q9BUY7 163 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 SLC29A3Q9BZD2 475 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 ADAP2Q9NPF8 381 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 TRPS1Q9UHF7 1281 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 SPO11Q9Y5K1 396 aa12.66□□□□□ -0.38
VSTM4-202ENST00000332853 FUT4P22083 530 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms