RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 WDR70Q9NW82 654 aa15.28■□□□□ 0.04
CCDC28A-201ENST00000332797 FETUBQ9UGM5 382 aa15.28■□□□□ 0.04
CCDC28A-201ENST00000332797 ACSL6Q9UKU0 697 aa15.28■□□□□ 0.04
CCDC28A-201ENST00000332797 ZMIZ1Q9ULJ6 1067 aa15.28■□□□□ 0.04
CCDC28A-201ENST00000332797 RNF112Q9ULX5 631 aa15.28■□□□□ 0.04
CCDC28A-201ENST00000332797 STMND1H3BQB6 276 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 STK17BO94768 372 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 TIAF1O95411 115 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 MSL3P1P0C860 447 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 ZNF28P17035 718 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 CCND1P24385 295 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 MAGEA12P43365 314 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 GLRBP48167 497 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 CDKL1Q00532 357 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 PRDX1Q06830 199 aaKnown RBP15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 NAA25Q14CX7 972 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 TGFBIQ15582 683 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 FAM83EQ2M2I3 478 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 CAPN13Q6MZZ7 669 aaPredicted RBP15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 PWWP2BQ6NUJ5 590 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 BPHLQ86WA6 291 aaPredicted RBP15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 OR8K5Q8NH50 307 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 OR1L3Q8NH93 324 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 KIAA1191Q96A73 305 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 ZUFSPQ96AP4 578 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 SGPP1Q9BX95 441 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 CHRNA10Q9GZZ6 450 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 PCBD2Q9H0N5 130 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 TBK1Q9UHD2 729 aa15.27■□□□□ 0.04
CCDC28A-201ENST00000332797 DMXL2Q8TDJ6 3036 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 IQANK1A0A1B0GTG1 560 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 SMIM23A6NLE4 172 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 TARM1B6A8C7 271 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 RRP8O43159 456 aaKnown RBP15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 HCRTR1O43613 425 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 NRP2O60462 931 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 KIAA0754O94854 1291 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 KLHL2O95198 593 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 LIPCP11150 499 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 EIF2S3P41091 472 aaKnown RBP15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 GABRA4P48169 554 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 ITGA1P56199 1179 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 ABATP80404 500 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 ST3GAL2Q16842 350 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 ZXDCQ2QGD7 858 aaPredicted RBP15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 ADCK2Q7Z695 626 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 TMEM126BQ8IUX1 230 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 DNAJC22Q8N4W6 341 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 OR56A3Q8NH54 315 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 STAG3L4Q8TBR4 150 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 CAVIN3Q969G5 261 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 MTBPQ96DY7 904 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 CUEDC1Q9NWM3 386 aaPredicted RBP15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 IRAK4Q9NWZ3 460 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 CD274Q9NZQ7 290 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 RAB21Q9UL25 225 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 PLCL2Q9UPR0 1127 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 KLK4Q9Y5K2 254 aa15.27■□□□□ 0.03
CCDC28A-201ENST00000332797 ANKRD12Q6UB98 2062 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 IGKV1-8A0A0C4DH67 115 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 OR2A25A4D2G3 310 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 CTSVO60911 334 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 SCRG1O75711 98 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 S100BP04271 92 aaPredicted RBP15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 SLCO1A2P46721 670 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 HNMTP50135 292 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 C18orf21Q32NC0 220 aaPredicted RBP15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 KLC3Q6P597 504 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 LCTLQ6UWM7 567 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 ISCA2Q86U28 154 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 C17orf64Q86WR6 236 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 EPS8L3Q8TE67 593 aaKnown RBP15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 RHBDF1Q96CC6 855 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 PLCD4Q9BRC7 762 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 EURLQ9NYK6 297 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 WWOXQ9NZC7 414 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 ANKMY1Q9P2S6 941 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 SERTAD3Q9UJW9 196 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 SH2B3Q9UQQ2 575 aa15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 TMEM184BQ9Y519 407 aaPredicted RBP15.26■□□□□ 0.03
CCDC28A-201ENST00000332797 APC2O95996 2303 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 SDK2Q58EX2 2172 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 TEX51A0A1B0GUA7 166 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 SUPT3HB4E1H0 165 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 E7EQ34 232 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 KLK10O43240 276 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 RAD1O60671 282 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 KERAO60938 352 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 SUPT3HO75486 399 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 RFPL1O75677 317 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 OR2B3O76000 313 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 DLGAP3O95886 979 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 NTRK1P04629 796 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 TUBBP07437 444 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 CTSBP07858 339 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 KCNC1P48547 511 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 CLN3Q13286 438 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 ACAP2Q15057 778 aa15.25■□□□□ 0.03
CCDC28A-201ENST00000332797 TGIF1Q15583 401 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms