RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 PGS1Q32NB8 556 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 ATG9BQ674R7 924 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 GCNT7Q6ZNI0 430 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 ANKRD46Q86W74 232 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 FAM86B1Q8N7N1 296 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 VN1R2Q8NFZ6 395 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 INPP5KQ9BT40 448 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 HPS4Q9NQG7 708 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 SMPD3Q9NY59 655 aaPredicted RBP16.88■□□□□ 0.29
DDX28-201ENST00000332395 ADGRE2Q9UHX3 823 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 DMTF1Q9Y222 760 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 DEAF1O75398 565 aaPredicted RBP16.87■□□□□ 0.29
DDX28-201ENST00000332395 B3GALT4O96024 378 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 PDHA2P29803 388 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 SLC6A11P48066 632 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 ZNF33BQ06732 778 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 CSTF3Q12996 717 aaKnown RBP16.87■□□□□ 0.29
DDX28-201ENST00000332395 DOC2AQ14183 400 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 FNDC3BQ53EP0 1204 aaKnown RBP16.87■□□□□ 0.29
DDX28-201ENST00000332395 TMEM132CQ8N3T6 1108 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 WDR20Q8TBZ3 569 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 MAGEE2Q8TD90 523 aaPredicted RBP16.87■□□□□ 0.29
DDX28-201ENST00000332395 GFM2Q969S9 779 aaKnown RBP16.87■□□□□ 0.29
DDX28-201ENST00000332395 AURKBQ96GD4 344 aaPredicted RBP16.87■□□□□ 0.29
DDX28-201ENST00000332395 FCRL1Q96LA6 429 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 HHIPQ96QV1 700 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 CPPED1Q9BRF8 314 aaPredicted RBP16.87■□□□□ 0.29
DDX28-201ENST00000332395 HAUS8Q9BT25 410 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 EBPLQ9BY08 206 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 UGT2B28Q9BY64 529 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 CARS2Q9HA77 564 aaKnown RBP16.87■□□□□ 0.29
DDX28-201ENST00000332395 NTN4Q9HB63 628 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 LIMD1Q9UGP4 676 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 CXCR6O00574 342 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 SLC16A8O95907 504 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 SOD1P00441 154 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 GSNP06396 782 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 RB1P06400 928 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 PCNAP12004 261 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 HOXB9P17482 250 aaPredicted RBP16.87■□□□□ 0.29
DDX28-201ENST00000332395 ITGB7P26010 798 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 IMPA1P29218 277 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 PTPN6P29350 595 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 MAPK9P45984 424 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 ADRM1Q16186 407 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 ENPP6Q6UWR7 440 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 TMC5Q6UXY8 1006 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 TRIM74Q86UV6 250 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 TRIM73Q86UV7 250 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 GPR180Q86V85 440 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 NLRP8Q86W28 1048 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 MICU2Q8IYU8 434 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 KIAA1958Q8N8K9 716 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 FBXO30Q8TB52 745 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 CYGBQ8WWM9 190 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 FOPNLQ96NB1 174 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 OR4K3Q96R72 315 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 PKP4Q99569 1192 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 GULP1Q9UBP9 304 aa16.87■□□□□ 0.29
DDX28-201ENST00000332395 CDH23Q9H251 3354 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 TCF20Q9UGU0 1960 aaKnown RBP16.86■□□□□ 0.29
DDX28-201ENST00000332395 OTOL1A6NHN0 477 aaPredicted RBP16.86■□□□□ 0.29
DDX28-201ENST00000332395 FAM220BPB1ANY3 271 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 UPK1AO00322 258 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 NPC1O15118 1278 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 PRSS23O95084 383 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 SCELO95171 688 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 CDKN2CP42773 168 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 HNRNPA1L2Q32P51 320 aaKnown RBP16.86■□□□□ 0.29
DDX28-201ENST00000332395 C9orf64Q5T6V5 341 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 TMEM214Q6NUQ4 689 aaKnown RBP16.86■□□□□ 0.29
DDX28-201ENST00000332395 TBPL2Q6SJ96 375 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 ADGRD2Q7Z7M1 963 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 CALHM3Q86XJ0 350 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 KLHDC8AQ8IYD2 350 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 C10orf111Q8N326 155 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 OR52E4Q8NGH9 312 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 ZFP28Q8NHY6 868 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 OR8D1Q8WZ84 308 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 FAM162AQ96A26 154 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 ARRDC3Q96B67 414 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 MTERF1Q99551 399 aaKnown RBP16.86■□□□□ 0.29
DDX28-201ENST00000332395 EPHX3Q9H6B9 360 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 CLK4Q9HAZ1 481 aaKnown RBP16.86■□□□□ 0.29
DDX28-201ENST00000332395 SPATA6Q9NWH7 488 aaPredicted RBP16.86■□□□□ 0.29
DDX28-201ENST00000332395 GPRC5BQ9NZH0 403 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 VPS29Q9UBQ0 182 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 LRRK1Q38SD2 2015 aa16.86■□□□□ 0.29
DDX28-201ENST00000332395 ALPK3Q96L96 1907 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 K7ESM1 405 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 RECQL5O94762 991 aaPredicted RBP16.85■□□□□ 0.29
DDX28-201ENST00000332395 NFATC1O95644 943 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 PRPS1L1P21108 318 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 KIR3DL1P43629 444 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 NRIP1P48552 1158 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 DDX39BQ13838 428 aaKnown RBP16.85■□□□□ 0.29
DDX28-201ENST00000332395 GAB4Q2WGN9 574 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 ZNF658BQ4V348 819 aaPredicted RBP16.85■□□□□ 0.29
DDX28-201ENST00000332395 FAM78AQ5JUQ0 283 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 OR4F3Q6IEY1 312 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms