RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 TRIM8Q9BZR9 551 aa13.53□□□□□ -0.24
TRAIP-201ENST00000331456 CCDC177Q9NQR7 707 aaPredicted RBP13.53□□□□□ -0.24
TRAIP-201ENST00000331456 ARMC1Q9NVT9 282 aa13.53□□□□□ -0.24
TRAIP-201ENST00000331456 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.53□□□□□ -0.24
TRAIP-201ENST00000331456 TRANK1O15050 2925 aa13.53□□□□□ -0.24
TRAIP-201ENST00000331456 DHRS12A0PJE2 317 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 PI15O43692 258 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 PRMT3O60678 531 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 GMNNO75496 209 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 GPIP06744 558 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 CTHP32929 405 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 AQP4P55087 323 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 YBX1P67809 324 aaKnown RBP13.52□□□□□ -0.24
TRAIP-201ENST00000331456 LAPTM5Q13571 262 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 E2F2Q14209 437 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 DPY19L1Q2PZI1 675 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 ATG9BQ674R7 924 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 ANO7Q6IWH7 933 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 KIAA1211LQ6NV74 962 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 MSANTD1Q6ZTZ1 278 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 SYT12Q8IV01 421 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 DCUN1D3Q8IWE4 304 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 TNIP2Q8NFZ5 429 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 OR14C36Q8NHC7 312 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 NUDT8Q8WV74 236 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 NEIL2Q969S2 332 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 SLCO4A1Q96BD0 722 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 PPWD1Q96BP3 646 aaKnown RBP13.52□□□□□ -0.24
TRAIP-201ENST00000331456 ITCHQ96J02 903 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 NR1H4Q96RI1 486 aaPredicted RBP13.52□□□□□ -0.24
TRAIP-201ENST00000331456 UHRF1Q96T88 793 aaPredicted RBP13.52□□□□□ -0.24
TRAIP-201ENST00000331456 LGR4Q9BXB1 951 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 C1QTNF2Q9BXJ5 285 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 EHD1Q9H4M9 534 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 ZNF576Q9H609 170 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 MBNL1Q9NR56 388 aaKnown RBP13.52□□□□□ -0.24
TRAIP-201ENST00000331456 CCM2LQ9NUG4 571 aaPredicted RBP13.52□□□□□ -0.24
TRAIP-201ENST00000331456 MAGEL2Q9UJ55 1249 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 ZFR2Q9UPR6 939 aaKnown RBP13.52□□□□□ -0.24
TRAIP-201ENST00000331456 PCDHB3Q9Y5E6 796 aa13.52□□□□□ -0.24
TRAIP-201ENST00000331456 HNRNPRO43390 633 aaKnown RBP13.52□□□□□ -0.25
TRAIP-201ENST00000331456 PLRG1O43660 514 aaKnown RBP13.52□□□□□ -0.25
TRAIP-201ENST00000331456 ERN1O75460 977 aaKnown RBP13.52□□□□□ -0.25
TRAIP-201ENST00000331456 PAK4O96013 591 aaPredicted RBP13.52□□□□□ -0.25
TRAIP-201ENST00000331456 C1GALT1C1LP0DN25 315 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 UMPSP11172 480 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 HOXB2P14652 356 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 UQCRBP14927 111 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 NPPBP16860 134 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 PRPS1L1P21108 318 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 TRIM23P36406 574 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 HSD17B2P37059 387 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 MRPS35P82673 323 aaKnown RBP13.52□□□□□ -0.25
TRAIP-201ENST00000331456 PLIN5Q00G26 463 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 TAP2Q03519 686 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 PGS1Q32NB8 556 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 TMEM196Q5HYL7 178 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 TBCELQ5QJ74 424 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 THEMIS2Q5TEJ8 643 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 TP53I13Q8NBR0 393 aaPredicted RBP13.52□□□□□ -0.25
TRAIP-201ENST00000331456 OR7G3Q8NG95 312 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 CANT1Q8WVQ1 401 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 LRTOMTQ8WZ04 291 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 STARD8Q92502 1023 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 TFGQ92734 400 aaPredicted RBP13.52□□□□□ -0.25
TRAIP-201ENST00000331456 WDR34Q96EX3 536 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 MSLNLQ96KJ4 702 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 Q9H521 79 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 SCML1Q9UN30 329 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 MAPRE3Q9UPY8 281 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 TICRRQ7Z2Z1 1910 aa13.52□□□□□ -0.25
TRAIP-201ENST00000331456 A0A1W2PQU0 124 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 RNGTTO60942 597 aaKnown RBP13.51□□□□□ -0.25
TRAIP-201ENST00000331456 KLF8O95600 359 aaPredicted RBP13.51□□□□□ -0.25
TRAIP-201ENST00000331456 BMP8BP34820 402 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 LTBRP36941 435 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 HSPA13P48723 471 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 MTPNP58546 118 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 PHEXP78562 749 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 BLMHQ13867 455 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 METRNLQ641Q3 311 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 GPR180Q86V85 440 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 RALGPS2Q86X27 583 aaPredicted RBP13.51□□□□□ -0.25
TRAIP-201ENST00000331456 SPDYE1Q8NFV5 336 aaPredicted RBP13.51□□□□□ -0.25
TRAIP-201ENST00000331456 SLC5A11Q8WWX8 675 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 EME1Q96AY2 570 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 HAUS8Q9BT25 410 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 THUMPD3Q9BV44 507 aaKnown RBP13.51□□□□□ -0.25
TRAIP-201ENST00000331456 SLC17A9Q9BYT1 436 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 MKRN2Q9H000 416 aaKnown RBP13.51□□□□□ -0.25
TRAIP-201ENST00000331456 KCNH6Q9H252 994 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 VAPAQ9P0L0 249 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 SLC23A2Q9UGH3 650 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 CNOT11Q9UKZ1 510 aaKnown RBP13.51□□□□□ -0.25
TRAIP-201ENST00000331456 ACSL5Q9ULC5 683 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 AURKCQ9UQB9 309 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 OR1A2Q9Y585 309 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 PCYT1BQ9Y5K3 369 aaPredicted RBP13.51□□□□□ -0.25
TRAIP-201ENST00000331456 A0A096LPI6 279 aa13.51□□□□□ -0.25
TRAIP-201ENST00000331456 PRR23AA6NEV1 266 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms