RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 IMPDH2P12268 514 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 PTGER1P34995 402 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 SH3BGRP55822 239 aaPredicted RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 ERVPABLB-1P60509 514 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 KLF10Q13118 480 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 CBX3Q13185 183 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 KCNC3Q14003 757 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 PTGR1Q14914 329 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 FAM83HQ6ZRV2 1179 aaPredicted RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 LPCAT2Q7L5N7 544 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 ADGRG6Q86SQ4 1221 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 CLEC14AQ86T13 490 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 ZNF740Q8NDX6 193 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 OBP2AQ9NY56 170 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 GMEB2Q9UKD1 530 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 HCN2Q9UL51 889 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 PCYT1BQ9Y5K3 369 aaPredicted RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 SNX8Q9Y5X2 465 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 FRYLO94915 3013 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 TNRC18O15417 2968 aaPredicted RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 CHD5Q8TDI0 1954 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 AREL1O15033 823 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 OR1F1O43749 312 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 DNAJA2O60884 412 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 H2AFYO75367 372 aaKnown RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 FAM58BPP0C7Q3 252 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 SRFP11831 508 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 COX4I1P13073 169 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 MTHFD2P13995 350 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 LBPP18428 481 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 POLR2CP19387 275 aaPredicted RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 PIK3R1P27986 724 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 SOAT1P35610 550 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 TAS2R38P59533 333 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 ADNP2Q6IQ32 1131 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 ZCCHC10Q8TBK6 192 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 APOOQ9BUR5 198 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 INTS7Q9NVH2 962 aaKnown RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 SIT1Q9Y3P8 196 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 DGKBQ9Y6T7 804 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 PLXNA3P51805 1871 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 MGAT4DA6NG13 374 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 TMEM114B3SHH9 223 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 C9P02748 559 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 SMIM18P0DKX4 95 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 XRCC1P18887 633 aaPredicted RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 HIST2H2ACQ16777 129 aaPredicted RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 HIST2H2AA3Q6FI13 130 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 USP53Q70EK8 1073 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 THOC6Q86W42 341 aaKnown RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 FBXW8Q8N3Y1 598 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 OR13H1Q8NG92 308 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 NCSTNQ92542 709 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 TADA1Q96BN2 335 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 LMLNQ96KR4 655 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 PPM1MQ96MI6 270 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 DPY30Q9C005 99 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 FSCN3Q9NQT6 498 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 EGFL7Q9UHF1 273 aa15.41■□□□□ 0.06
PDGFB-201ENST00000331163 ZFR2Q9UPR6 939 aaKnown RBP15.41■□□□□ 0.06
PDGFB-201ENST00000331163 SPTA1P02549 2419 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 ANKDD1BA6NHY2 528 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 GMNNO75496 209 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 CLDN9O95484 217 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 IL1RL1Q01638 556 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 NFYCQ13952 458 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 ABRAXAS2Q15018 415 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 LRIT3Q3SXY7 679 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 CAPN13Q6MZZ7 669 aaPredicted RBP15.4■□□□□ 0.06
PDGFB-201ENST00000331163 PARGQ86W56 976 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 RAD51AP1Q96B01 352 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 TCEAL2Q9H3H9 227 aaPredicted RBP15.4■□□□□ 0.06
PDGFB-201ENST00000331163 GSTO2Q9H4Y5 243 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 NUDT4Q9NZJ9 180 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 CDH1P12830 882 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 NAA20P61599 178 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 ACVR1Q04771 509 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 SLBPQ14493 270 aaKnown RBP eCLIP15.4■□□□□ 0.06
PDGFB-201ENST00000331163 MFSD4BQ5TF39 518 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 SULT1C3Q6IMI6 304 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 CYP2U1Q7Z449 544 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 KBTBD6Q86V97 674 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 Q8N9G6 341 aaPredicted RBP15.4■□□□□ 0.06
PDGFB-201ENST00000331163 BIRC7Q96CA5 298 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 KLHDC7BQ96G42 594 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 RSPH9Q9H1X1 276 aaPredicted RBP15.4■□□□□ 0.06
PDGFB-201ENST00000331163 E7EQ34 232 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 MATN2O00339 956 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 TNFAIP8O95379 198 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 AOAHP28039 575 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 SLC5A2P31639 672 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 ARL4DP49703 201 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 FGL2Q14314 439 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 SBSNQ6UWP8 590 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 PRSS58Q8IYP2 241 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 LSMEM2Q8N112 164 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 CBARPQ8N350 705 aaPredicted RBP15.4■□□□□ 0.06
PDGFB-201ENST00000331163 JADE3Q92613 823 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 SLC6A18Q96N87 628 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 PKP4Q99569 1192 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms