RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 ACTRT2Q8TDY3 377 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 SLC37A2Q8TED4 501 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 ASB11Q8WXH4 323 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 ELMO1Q92556 727 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 NAT6Q93015 286 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 TMEM159Q96B96 161 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 MAELQ96JY0 434 aaKnown RBP15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 FOPNLQ96NB1 174 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 TCF7L2Q9NQB0 619 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 LNPEPQ9UIQ6 1025 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 ITPR1Q14643 2758 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 FCHO1O14526 889 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 DIAPH2O60879 1101 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 KCNJ13O60928 360 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 CSO75390 466 aaKnown RBP15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 CHEK2O96017 543 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 RPLP0P05388 317 aaKnown RBP15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 CALB2P22676 271 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 MPSTP25325 297 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 GGT5P36269 586 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 CFHR1Q03591 330 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 CYP4F3Q08477 520 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 LRP8Q14114 963 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 SYTL3Q4VX76 610 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 NKAIN2Q5VXU1 208 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 SPRED1Q7Z699 444 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 LRRTM4Q86VH4 590 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 RASGRP3Q8IV61 690 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 SFRP1Q8N474 314 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 CEP70Q8NHQ1 597 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 ATL1Q8WXF7 558 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 NSL1Q96IY1 281 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 ZNF382Q96SR6 550 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 MEAF6Q9HAF1 191 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 WDR37Q9Y2I8 494 aa15.94■□□□□ 0.14
PDLIM1-201ENST00000329399 AGRPO00253 132 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 KMOO15229 486 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 NUDT21O43809 227 aaKnown RBP15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 POP7O75817 140 aaKnown RBP15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 MATN4O95460 622 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 ESRRBO95718 433 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 PROS1P07225 676 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 ITGB6P18564 788 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 RPL10P27635 214 aaKnown RBP15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 PRDX6P30041 224 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 HSPA14Q0VDF9 509 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 RPA4Q13156 261 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 TUBB3Q13509 450 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 ISXQ2M1V0 245 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 ATG14Q6ZNE5 492 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 USP53Q70EK8 1073 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 ZNF438Q7Z4V0 828 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 TRAPPC5Q8IUR0 188 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 LILRA3Q8N6C8 439 aaPredicted RBP15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 FBXO15Q8NCQ5 510 aaPredicted RBP15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 EXT2Q93063 718 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 LRRN3Q9H3W5 708 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 OSGEPL1Q9H4B0 414 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 SYNDIG1Q9H7V2 258 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 PCTPQ9UKL6 214 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 ENTPD2Q9Y5L3 495 aa15.93■□□□□ 0.14
PDLIM1-201ENST00000329399 ZFYVE26Q68DK2 2539 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 SLC5A10A0PJK1 596 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 AZIN1O14977 448 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 KATNA1O75449 491 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 OTCP00480 354 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 UROSP10746 265 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 PCSK2P16519 638 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 ALDH4A1P30038 563 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 ZNF574Q6ZN55 896 aaPredicted RBP15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 RNF165Q6ZSG1 346 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 UBE2R2Q712K3 238 aaPredicted RBP15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 MAVSQ7Z434 540 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 SLC22A15Q8IZD6 547 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 CACTIN-AS1Q8N1I8 211 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 CMTM5Q96DZ9 223 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 HGH1Q9BTY7 390 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 ZNF624Q9P2J8 865 aaPredicted RBP15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 IKZF3Q9UKT9 509 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 CHD6Q8TD26 2715 aa15.92■□□□□ 0.14
PDLIM1-201ENST00000329399 LOC400499M0QZD8 3231 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 CAPN14A8MX76 684 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 E2F3O00716 465 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 CATP04040 527 aaKnown RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 ENO1P06733 434 aaKnown RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 HOXB3P14651 431 aaPredicted RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 MAP4P27816 1152 aaKnown RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 CD1CP29017 333 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 SLC19A1P41440 591 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 CLCNKAP51800 687 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 NFE2L1Q14494 772 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 CLCA4Q14CN2 919 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 AMZ1Q400G9 498 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 CPSF7Q8N684 471 aaKnown RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 KDF1Q8NAX2 398 aaPredicted RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 HM13Q8TCT9 377 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 MAGEC3Q8TD91 643 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 AGAP11Q8TF27 550 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 RHBDF1Q96CC6 855 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms