RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 ALOX12BO75342 701 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 IPO13O94829 963 aaKnown RBP13.5□□□□□ -0.25
RPAIN-201ENST00000327154 MED26O95402 600 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 F7P08709 466 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-201ENST00000327154 PKMP14618 531 aaKnown RBP13.5□□□□□ -0.25
RPAIN-201ENST00000327154 PAMP19021 973 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 OGNP20774 298 aaKnown RBP13.5□□□□□ -0.25
RPAIN-201ENST00000327154 ITGA3P26006 1051 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 ATP5DP30049 168 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 CMPK1P30085 196 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 AIMP2Q13155 320 aaKnown RBP13.5□□□□□ -0.25
RPAIN-201ENST00000327154 KLHL38Q2WGJ6 581 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.5□□□□□ -0.25
RPAIN-201ENST00000327154 SUSD1Q6UWL2 747 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 KIRREL2Q6UWL6 708 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 IQCKQ8N0W5 287 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 ZADH2Q8N4Q0 377 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 OSBPL9Q96SU4 736 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 SPSB2Q99619 263 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 DPH7Q9BTV6 452 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 SLC6A20Q9NP91 592 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 SPATA7Q9P0W8 599 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 SAMD15Q9P1V8 674 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 SNX12Q9UMY4 172 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 HS3ST3B1Q9Y662 390 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 FAM169AQ9Y6X4 670 aa13.5□□□□□ -0.25
RPAIN-201ENST00000327154 NAV2Q8IVL1 2488 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 FAM237BA0A1B0GVD1 139 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 VSTM2BA6NLU5 285 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 E5RI56 91 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 GOLGA8MH3BSY2 632 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 PGRMC1O00264 195 aaKnown RBP13.49□□□□□ -0.25
RPAIN-201ENST00000327154 PSIP1O75475 530 aaKnown RBP13.49□□□□□ -0.25
RPAIN-201ENST00000327154 CTBP1Q13363 440 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 TSTA3Q13630 321 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-201ENST00000327154 DHX34Q14147 1143 aaKnown RBP13.49□□□□□ -0.25
RPAIN-201ENST00000327154 PRAMEF13Q5VWM6 474 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 ARMC3Q5W041 872 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 SPNS2Q8IVW8 549 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 PARP9Q8IXQ6 854 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 RASGEF1CQ8N431 466 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 PRR7Q8TB68 274 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 COG1Q8WTW3 980 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 SMPDL3AQ92484 453 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 TM9SF4Q92544 642 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 ZNF669Q96BR6 464 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-201ENST00000327154 PKP4Q99569 1192 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 SLC30A3Q99726 388 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 SLC29A3Q9BZD2 475 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 ILKAPQ9H0C8 392 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-201ENST00000327154 ZNF304Q9HCX3 659 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 MRPS30Q9NP92 439 aaKnown RBP13.49□□□□□ -0.25
RPAIN-201ENST00000327154 ASF1BQ9NVP2 202 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 INTS10Q9NVR2 710 aaKnown RBP13.49□□□□□ -0.25
RPAIN-201ENST00000327154 NXT1Q9UKK6 140 aaKnown RBP13.49□□□□□ -0.25
RPAIN-201ENST00000327154 VPS9D1Q9Y2B5 631 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 FER1L5A0AVI2 2057 aa13.49□□□□□ -0.25
RPAIN-201ENST00000327154 USP9XQ93008 2570 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-201ENST00000327154 RP1L1Q8IWN7 2480 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-201ENST00000327154 OR2A25A4D2G3 310 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 CTAGE9A4FU28 777 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 H0YGG7 62 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 MYO1CO00159 1063 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 USP1O94782 785 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 ERGP11308 486 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 MLNP12872 115 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 RPA3P35244 121 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-201ENST00000327154 GLRBP48167 497 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 CLCN7P51798 805 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 ARF3P61204 181 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-201ENST00000327154 THOC5Q13769 683 aaKnown RBP13.48□□□□□ -0.25
RPAIN-201ENST00000327154 RBBP7Q16576 425 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 ZNF470Q6ECI4 717 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 PRMT9Q6P2P2 845 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 RNF44Q7L0R7 432 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 DENND6AQ8IWF6 608 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 PRSS58Q8IYP2 241 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 MCUQ8NE86 351 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 INPP5DQ92835 1189 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 NAP1L3Q99457 506 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-201ENST00000327154 NAPGQ99747 312 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-201ENST00000327154 ZFYVE21Q9BQ24 234 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 PLCD4Q9BRC7 762 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 MESP1Q9BRJ9 268 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 FBXO6Q9NRD1 293 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-201ENST00000327154 FAM114A2Q9NRY5 505 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 SEMA3GQ9NS98 782 aa13.48□□□□□ -0.25
RPAIN-201ENST00000327154 USP9YO00507 2555 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-201ENST00000327154 SNRNP200O75643 2136 aaKnown RBP13.48□□□□□ -0.25
RPAIN-201ENST00000327154 ZCWPW2A0A1B0GU75 182 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 CBX6O95503 412 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 CATP04040 527 aaKnown RBP13.47□□□□□ -0.25
RPAIN-201ENST00000327154 ZGLP1P0C6A0 271 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 ERVK-10P10266 1014 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 TCP1P17987 556 aaKnown RBP13.47□□□□□ -0.25
RPAIN-201ENST00000327154 HSD17B2P37059 387 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 COILP38432 576 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-201ENST00000327154 PNLIPRP1P54315 467 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 OCA2Q04671 838 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 KLC1Q07866 573 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms