RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 PIH1D2Q8WWB5 315 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 ZNF641Q96N77 438 aaPredicted RBP12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 CLMPQ9H6B4 373 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 BRD9Q9H8M2 597 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 SACM1LQ9NTJ5 587 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 PAK1IP1Q9NWT1 392 aaPredicted RBP12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 CLEC4EQ9ULY5 219 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 ZNF510Q9Y2H8 683 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 PIKFYVEQ9Y2I7 2098 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 PRSS23O95084 383 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 CD160O95971 181 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 F11P03951 625 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 SERPINB1P30740 379 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 CTSOP43234 321 aaPredicted RBP12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 OR1E2P47887 323 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 PRIM2P49643 509 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 ABHD18Q0P651 414 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 MTA1Q13330 715 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 TUBA3CQ13748 450 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 DHRS4L2Q6PKH6 230 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 PRR23BQ6ZRT6 265 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 USP45Q70EL2 814 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 CHST9Q7L1S5 443 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 PSD4Q8NDX1 1056 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 TRUB1Q8WWH5 349 aaKnown RBP12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 ABCB8Q9NUT2 735 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 DNAJC11Q9NVH1 559 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 TBCCD1Q9NVR7 557 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 TSC22D4Q9Y3Q8 395 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 SNX8Q9Y5X2 465 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 HTR1AP08908 422 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 NUDT7P0C024 238 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 CCR7P32248 378 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 EPHB3P54753 998 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 GP2P55259 537 aaKnown RBP12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 ISL1P61371 349 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 VLDLRP98155 873 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 TRIM71Q2Q1W2 868 aaKnown RBP12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 FRG2Q64ET8 278 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 ALG1LQ6GMV1 187 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 NOXRED1Q6NXP6 359 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 FAM180BQ6P0A1 224 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 C2orf73Q8N5S3 287 aaPredicted RBP12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 MRPS31Q92665 395 aaKnown RBP12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 SH3YL1Q96HL8 342 aaPredicted RBP12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 CASD1Q96PB1 797 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 FRG2BQ96QU4 278 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 THUMPD1Q9NXG2 353 aaKnown RBP12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 IL37Q9NZH6 218 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 ERGIC3Q9Y282 383 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 TMEM88BA6NKF7 163 aa12.52□□□□□ -0.4
HMGCS1-201ENST00000325110 TBX1O43435 398 aa12.52□□□□□ -0.4
HMGCS1-201ENST00000325110 HPRP00739 348 aa12.52□□□□□ -0.4
HMGCS1-201ENST00000325110 HPCAL1P37235 193 aa12.52□□□□□ -0.4
HMGCS1-201ENST00000325110 C11orf74Q86VG3 221 aa12.52□□□□□ -0.4
HMGCS1-201ENST00000325110 ZNF366Q8N895 744 aa12.52□□□□□ -0.4
HMGCS1-201ENST00000325110 ZBTB8BQ8NAP8 495 aaPredicted RBP12.52□□□□□ -0.4
HMGCS1-201ENST00000325110 HTATIP2Q9BUP3 242 aa12.52□□□□□ -0.4
HMGCS1-201ENST00000325110 KCNH6Q9H252 994 aa12.52□□□□□ -0.4
HMGCS1-201ENST00000325110 ATAD3AQ9NVI7 634 aa12.52□□□□□ -0.4
HMGCS1-201ENST00000325110 DOCK4Q8N1I0 1966 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 UGT2B11O75310 529 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 CD70P32970 193 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 SLC13A2Q13183 592 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 MADCAM1Q13477 382 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 COLEC12Q5KU26 742 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 GPR149Q86SP6 731 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 VRK3Q8IV63 474 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 TAGAPQ8N103 731 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 STX19Q8N4C7 294 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 VPS37AQ8NEZ2 397 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 PROX1Q92786 737 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 ENPP5Q9UJA9 477 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 RPS6KA6Q9UK32 745 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 PPT2Q9UMR5 302 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 GREB1Q4ZG55 1949 aa12.52□□□□□ -0.41
HMGCS1-201ENST00000325110 TRIM64CA6NLI5 447 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 CA12O43570 354 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 ZDHHC11BP0C7U3 371 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 PRPS2P11908 318 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 IMPDH2P12268 514 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 ALOX12P18054 663 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 CLDN8P56748 225 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 MRPL58Q14197 206 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 DPY19L1Q2PZI1 675 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 ZNF691Q5VV52 312 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 CPZQ66K79 652 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 ATG9BQ674R7 924 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 Q6ZVU0 165 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 B3GNT8Q7Z7M8 397 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 BBS7Q8IWZ6 715 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 SVOPQ8N4V2 548 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 POC5Q8NA72 575 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 OR4K1Q8NGD4 311 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 OR5AK3PQ8NH89 298 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 ZNF347Q96SE7 839 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 CPPED1Q9BRF8 314 aaPredicted RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 MRPL9Q9BYD2 267 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 TRPS1Q9UHF7 1281 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 ZNF639Q9UID6 485 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms