RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 C14orf28Q4W4Y0 310 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 SLC9B1Q4ZJI4 515 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 SGO1Q5FBB7 561 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.74□□□□□ -0.05
PRPF3-201ENST00000324862 NKAIN2Q5VXU1 208 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 OGFOD3Q6PK18 319 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 SPATA21Q7Z572 469 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 C17orf82Q86X59 251 aaPredicted RBP14.74□□□□□ -0.05
PRPF3-201ENST00000324862 PLD3Q8IV08 490 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 EID2Q8N6I1 236 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 SMPDL3AQ92484 453 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 NUSAP1Q9BXS6 441 aaKnown RBP14.74□□□□□ -0.05
PRPF3-201ENST00000324862 PSD3Q9NYI0 1048 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 HAO1Q9UJM8 370 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 CFAP54Q96N23 3096 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 EP300Q09472 2414 aaPredicted RBP14.74□□□□□ -0.05
PRPF3-201ENST00000324862 ISM1B1AKI9 464 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 H7BY64 318 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 MATN2O00339 956 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 PRAMEF10O60809 474 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 OTCP00480 354 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 FASLGP48023 281 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 IRF8Q02556 426 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 BIRC2Q13490 618 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 PIGWQ7Z7B1 504 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 METTL6Q8TCB7 284 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 C3orf30Q96M34 536 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 PRAP1Q96NZ9 151 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 NTMT1Q9BV86 223 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 TRIM55Q9BYV6 548 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 KCNE2Q9Y6J6 123 aa14.74□□□□□ -0.05
PRPF3-201ENST00000324862 GSAPA4D1B5 854 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 KHNYNO15037 678 aaKnown RBP14.73□□□□□ -0.05
PRPF3-201ENST00000324862 SIGLEC6O43699 453 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 PRICKLE3O43900 615 aaPredicted RBP14.73□□□□□ -0.05
PRPF3-201ENST00000324862 CRCPO75575 148 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 CLDN9O95484 217 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 EPHA3P29320 983 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 ALDH4A1P30038 563 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 SHMT2P34897 504 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 BTKQ06187 659 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 SPEM2Q0P670 501 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 SF1Q15637 639 aaKnown RBP14.73□□□□□ -0.05
PRPF3-201ENST00000324862 KANK2Q63ZY3 851 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 SLCO4C1Q6ZQN7 724 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 KLHDC8AQ8IYD2 350 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 SLC5A11Q8WWX8 675 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 HRASLS2Q9NWW9 162 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 LRIT1Q9P2V4 623 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 DIAPH2O60879 1101 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 SH3BGRLO75368 114 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 LINC00032P0C843 101 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 GNAZP19086 355 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 CCT8P50990 548 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 NUBP1P53384 320 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 KIAA1614Q5VZ46 1190 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 CLYBLQ8N0X4 340 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 ARL10Q8N8L6 244 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 FLVCR1-AS1Q8TAF5 88 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 TWIST2Q8WVJ9 160 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 C10orf82Q8WW14 230 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 LOXL4Q96JB6 756 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 APOLD1Q96LR9 279 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 SLC38A3Q99624 504 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 TMEM120AQ9BXJ8 343 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 SYNPO2LQ9H987 977 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 OR6C2Q9NZP2 312 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 CSNK1G3Q9Y6M4 447 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 ASXL3Q9C0F0 2248 aa14.73□□□□□ -0.05
PRPF3-201ENST00000324862 KCNE1BA0A087WTH5 132 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 LY6G6EA0A0G2JKS1 128 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 FEZF1A0PJY2 475 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 GIPC1O14908 333 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 PIP5K1BO14986 540 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 SLC2A4P14672 509 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 LSSP48449 732 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 PPM1FP49593 454 aaPredicted RBP14.72□□□□□ -0.05
PRPF3-201ENST00000324862 ABRAXAS2Q15018 415 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 ICE2Q659A1 982 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 LCTLQ6UWM7 567 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 RAB42Q8N4Z0 105 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 Q8N9G6 341 aaPredicted RBP14.72□□□□□ -0.05
PRPF3-201ENST00000324862 HMGCLL1Q8TB92 370 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 ATOH1Q92858 354 aaPredicted RBP14.72□□□□□ -0.05
PRPF3-201ENST00000324862 OR52B2Q96RD2 323 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 NSRP1Q9H0G5 558 aaKnown RBP14.72□□□□□ -0.05
PRPF3-201ENST00000324862 SLC6A20Q9NP91 592 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 EVA1BQ9NVM1 165 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 DYRK1BQ9Y463 629 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 PCDHGA5Q9Y5G8 931 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 U3KQA8 63 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 PIPSLA2A3N6 862 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 HDAC3O15379 428 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 TGDSO95455 350 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 CER1O95813 267 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 SYPP08247 313 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 FGF4P08620 206 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 EBLN1P0CF75 366 aa14.72□□□□□ -0.05
PRPF3-201ENST00000324862 TROVE2P10155 538 aaKnown RBP eCLIP14.72□□□□□ -0.05
PRPF3-201ENST00000324862 HGFP14210 728 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms