RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 IRAK2O43187 625 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 IFNA21P01568 189 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 HK1P19367 917 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 CXCR1P25024 350 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 GRK5P34947 590 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 PPIGQ13427 754 aaKnown RBP eCLIP20.54■□□□□ 0.886e-7■■□□□ 13.5
RNF40-201ENST00000324685 KLHL26Q53HC5 615 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 CMTM7Q96FZ5 175 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 SLC28A3Q9HAS3 691 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 ZNF536O15090 1300 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 HAS3O00219 553 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 WNT9AO14904 365 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 FESP07332 822 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 CHRNA4P43681 627 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 PHC1P78364 1004 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 ARMCX6Q7L4S7 300 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 SLC35B2Q8TB61 432 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 COL21A1Q96P44 957 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 DCSTAMPQ9H295 470 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 RNF121Q9H920 327 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 GDAP2Q9NXN4 497 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 ZNF69Q9UC07 566 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 SAP18O00422 153 aaKnown RBP20.54■□□□□ 0.88
RNF40-201ENST00000324685 RCBTB2O95199 551 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 ITGB1P05556 798 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 MAGEA2P43356 314 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 LRRC32Q14392 662 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 SLC10A6Q3KNW5 377 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 PAQR3Q6TCH7 311 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 ZNF641Q96N77 438 aaPredicted RBP20.54■□□□□ 0.88
RNF40-201ENST00000324685 CYP2S1Q96SQ9 504 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 GAL3ST1Q99999 423 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 OAZ3Q9UMX2 235 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 PCDHGB2Q9Y5G2 931 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 ZNF726A6NNF4 738 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 VNN1O95497 513 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 PTGS2P35354 604 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 ADAM15Q13444 863 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 REM2Q8IYK8 340 aaPredicted RBP20.54■□□□□ 0.88
RNF40-201ENST00000324685 OR13C4Q8NGS5 318 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 ACDQ96AP0 544 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 ZC3H10Q96K80 434 aaKnown RBP20.54■□□□□ 0.88
RNF40-201ENST00000324685 CDK15Q96Q40 435 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 ADAP2Q9NPF8 381 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 MRPS17Q9Y2R5 130 aaKnown RBP20.54■□□□□ 0.88
RNF40-201ENST00000324685 COQ4Q9Y3A0 265 aa20.54■□□□□ 0.88
RNF40-201ENST00000324685 FAM159BA6NKW6 160 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 CAPN15O75808 1086 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 HLA-DQB2P05538 268 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 ARFRP1Q13795 201 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 NCBP2-AS2Q69YL0 99 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 GHDCQ8N2G8 530 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 SMG8Q8ND04 991 aaKnown RBP20.53■□□□□ 0.88
RNF40-201ENST00000324685 NR4A3Q92570 626 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 RPL10LQ96L21 214 aaKnown RBP20.53■□□□□ 0.88
RNF40-201ENST00000324685 NID2Q14112 1375 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 YES1P07947 543 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 SMPD1P17405 629 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 PRAMEF14Q5SWL7 426 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 PRAMEF13Q5VWM6 474 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 OSBPL2Q9H1P3 480 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 BRD7Q9NPI1 651 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 TRIM36Q9NQ86 728 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 BTBD19C9JJ37 291 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 GNB5O14775 395 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 HDDC3Q8N4P3 179 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 EPYCQ99645 322 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 ZNF670-ZNF695F2Z2N8 137 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 SEPT4O43236 478 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 ITM2AO43736 263 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 LGR5O75473 907 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 CREB1P16220 341 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 PRKCHP24723 683 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 GRSF1Q12849 480 aaKnown RBP eCLIP20.53■□□□□ 0.88
RNF40-201ENST00000324685 TPRG1LQ5T0D9 272 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 CCM2Q9BSQ5 444 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 CYTH4Q9UIA0 394 aa20.53■□□□□ 0.88
RNF40-201ENST00000324685 SNAPC5O75971 98 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 ELNP15502 786 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 BTN3A2P78410 334 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 PDCD4Q53EL6 469 aaKnown RBP20.52■□□□□ 0.88
RNF40-201ENST00000324685 EIF5AL1Q6IS14 154 aaKnown RBP20.52■□□□□ 0.88
RNF40-201ENST00000324685 FZD8Q9H461 694 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 SUV39H2Q9H5I1 410 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 EBF2Q9HAK2 575 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 RIMS1Q86UR5 1692 aaKnown RBP20.52■□□□□ 0.88
RNF40-201ENST00000324685 COQ9O75208 318 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 CD72P21854 359 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 PRKCDQ05655 676 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 DGLUCYQ7Z3D6 616 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 CLEC4CQ8WTT0 213 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 ADAD1Q96M93 576 aaKnown RBP20.52■□□□□ 0.88
RNF40-201ENST00000324685 ZSCAN5AQ9BUG6 496 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 SEZ6LQ9BYH1 1024 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 TBL1XR1Q9BZK7 514 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 UCK2Q9BZX2 261 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 C1orf21Q9H246 121 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 ZSCAN5BA6NJL1 495 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 ARL6IP5O75915 188 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 TPGS2Q68CL5 300 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms