RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PIGFQ07326 219 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 METTL21CQ5VZV1 264 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 RANBP3LQ86VV4 465 aaPredicted RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 MFSD8Q8NHS3 518 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 DNAJA3Q96EY1 480 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 DEFB118Q96PH6 123 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 GDAP2Q9NXN4 497 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 GRIN2DO15399 1336 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 PRMT5O14744 637 aaPredicted RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 PLD2O14939 933 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 GRM6O15303 877 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 TGDSO95455 350 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 PLGP00747 810 aaPredicted RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 HGSNATQ68CP4 663 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 SLC2A7Q6PXP3 512 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 KLHL36Q8N4N3 616 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ATAD1Q8NBU5 361 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 RPL10LQ96L21 214 aaKnown RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 HIST1H2AAQ96QV6 131 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 MCCC2Q9HCC0 563 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 BTNL10A8MVZ5 291 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TLR4O00206 839 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 CREMQ03060 361 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 CAPSQ13938 189 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 IQCCQ4KMZ1 466 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 MFSD5Q6N075 450 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 OVCA2Q8WZ82 227 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TM9SF2Q99805 663 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TMEM246Q9BRR3 403 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 CMAHPQ9Y471 501 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 A0A1W2PPK0 400 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 ILVBLA1L0T0 632 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 A8MU76 341 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 CAPN14A8MX76 684 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 EVI2BP34910 448 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 PSEN1P49768 467 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 DGKQP52824 942 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 UNC93AQ86WB7 457 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TIGD4Q8IY51 512 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 SHC3Q92529 594 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 SLC39A3Q9BRY0 314 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TUBG2Q9NRH3 451 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 KIAA1522Q9P206 1035 aaPredicted RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 AASSQ9UDR5 926 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 HCN2Q9UL51 889 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 CDKN1CP49918 316 aaPredicted RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 NFE2L1Q14494 772 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 PUS10Q3MIT2 529 aaKnown RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 HSD17B12Q53GQ0 312 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 RBM48Q5RL73 367 aaKnown RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 SLC16A9Q7RTY1 509 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 ZC3HC1Q86WB0 502 aaKnown RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 DEFB119Q8N690 84 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 RFKQ969G6 155 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 MEAF6Q9HAF1 191 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 RHCGQ9UBD6 479 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 COPS7AQ9UBW8 275 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 CDH7Q9ULB5 785 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 HYKKA2RU49 373 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TOXO94900 526 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 CLDN9O95484 217 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 MAP3K8P41279 467 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 UBXN11Q5T124 520 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 HMGN2P46Q86SG4 172 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 COX18Q8N8Q8 333 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TMBIM1Q969X1 311 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 SLC35A5Q9BS91 424 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TAPBPLQ9BX59 468 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 ABCD2Q9UBJ2 740 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 MGAT4CQ9UBM8 478 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 RIMS1Q86UR5 1692 aaKnown RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 STK16O75716 305 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 SPAM1P38567 509 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 GBX2P52951 348 aaPredicted RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 KANK2Q63ZY3 851 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 C1orf94Q6P1W5 598 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 OR6Q1Q8NGQ2 317 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 ZSWIM3Q96MP5 696 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 MUC13Q9H3R2 512 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 CENPMQ9NSP4 180 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 WNK1Q9H4A3 2382 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 ELOA3DA6NLF2 546 aaPredicted RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 EEF1E1O43324 174 aaKnown RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 REM1O75628 298 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 OR4F21O95013 312 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 RLN2P04090 185 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 EDNRAP25101 427 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 APLP1P51693 650 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 ACTR3P61158 418 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 ZNF674Q2M3X9 581 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 ELOA3BQ3SY89 546 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 CEP97Q8IW35 865 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 ESX1Q8N693 406 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 ELOA3Q8NG57 546 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 OR7D4Q8NG98 312 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 SLC22A8Q8TCC7 542 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 ESAMQ96AP7 390 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 OR2AG1Q9H205 316 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TMED5Q9Y3A6 229 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 IL7P13232 177 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms