RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PIWIL3Q7Z3Z3 882 aaKnown RBP16.9■□□□□ 0.3
COL9A1-201ENST00000320755 TERB1Q8NA31 727 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 VOPP1Q96AW1 172 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 CMTM7Q96FZ5 175 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 BLOC1S6Q9UL45 172 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 ERVK-11Q9UQG0 969 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 AGAP14A8MT82 685 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 LRG1P02750 347 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 AMD1P17707 334 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 ALDH4A1P30038 563 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 ABHD18Q0P651 414 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 LRIF1Q5T3J3 769 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 HTR3DQ70Z44 454 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 LRRC70Q7Z2Q7 622 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 CHCHD4Q8N4Q1 142 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 LMNTD1Q8N9Z9 388 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 REXO5Q96IC2 774 aaKnown RBP16.9■□□□□ 0.3
COL9A1-201ENST00000320755 SLC46A2Q9BY10 475 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 PSME2Q9UL46 239 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 KCNE1BA0A087WTH5 132 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 TOR1BO14657 336 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 TGM5O43548 720 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 OLFM2O95897 454 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 C8GP07360 202 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 CYP2A7P20853 494 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 GSTM2P28161 218 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 EPHA2P29317 976 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 PBLDP30039 288 aaPredicted RBP16.9■□□□□ 0.3
COL9A1-201ENST00000320755 ETV3P41162 512 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 PREPP48147 710 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 CSNK1DP48730 415 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 TMBIM6P55061 237 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 MLLT10P55197 1068 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 DGCR6Q14129 220 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 SPCS2Q15005 226 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 SLC15A4Q8N697 577 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 GPR156Q8NFN8 814 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 PJA1Q8NG27 643 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 PLEKHA8Q96JA3 519 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 RHNO1Q9BSD3 238 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 RASSF1Q9NS23 344 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 ASIC5Q9NY37 505 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 SPG21Q9NZD8 308 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 CORINQ9Y5Q5 1042 aa16.9■□□□□ 0.3
COL9A1-201ENST00000320755 AXIN1O15169 862 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 HTR1BP28222 390 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 GRSF1Q12849 480 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL9A1-201ENST00000320755 EPS8Q12929 822 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 NAE1Q13564 534 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 CCSMST1Q4G0I0 132 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 CPZQ66K79 652 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 ANGPTL8Q6UXH0 198 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 HIPK1Q86Z02 1210 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 ZNF366Q8N895 744 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 UBE2FQ969M7 185 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 HCFC1R1Q9NWW0 138 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 C5orf42Q9H799 3197 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 TRAV19A0A0A6YYK7 116 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 WNT9AO14904 365 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 POP4O95707 220 aaKnown RBP16.89■□□□□ 0.29
COL9A1-201ENST00000320755 ANGPTL1O95841 491 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 ABCB1P08183 1280 aaPredicted RBP16.89■□□□□ 0.29
COL9A1-201ENST00000320755 LAMP1P11279 417 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 MAP2K4P45985 399 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 CDK5R2Q13319 367 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 CBX2Q14781 532 aaPredicted RBP16.89■□□□□ 0.29
COL9A1-201ENST00000320755 ZNF829Q3KNS6 432 aaPredicted RBP16.89■□□□□ 0.29
COL9A1-201ENST00000320755 HSD11B1LQ7Z5J1 315 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 RAB2BQ8WUD1 216 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 NELL1Q92832 810 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 SH3KBP1Q96B97 665 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 RDH12Q96NR8 316 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 LYSMD1Q96S90 227 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 DNAAF2Q9NVR5 837 aaKnown RBP16.89■□□□□ 0.29
COL9A1-201ENST00000320755 USE1Q9NZ43 259 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 PDP1Q9P0J1 537 aaPredicted RBP16.89■□□□□ 0.29
COL9A1-201ENST00000320755 TMEM9Q9P0T7 183 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 ERVK-18Q9QC07 812 aa16.89■□□□□ 0.29
COL9A1-201ENST00000320755 CCL16O15467 120 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 NUDT7P0C024 238 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 JUNBP17275 347 aaPredicted RBP16.88■□□□□ 0.29
COL9A1-201ENST00000320755 CD22P20273 847 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 MAPK1P28482 360 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 PHEXP78562 749 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 SMN1Q16637 294 aaKnown RBP16.88■□□□□ 0.29
COL9A1-201ENST00000320755 UGT8Q16880 541 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 ZNF691Q5VV52 312 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 PDE12Q6L8Q7 609 aaKnown RBP16.88■□□□□ 0.29
COL9A1-201ENST00000320755 HORMAD1Q86X24 394 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 DDHD1Q8NEL9 900 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 CYB5D2Q8WUJ1 264 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 BORCS5Q969J3 196 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 RAD21L1Q9H4I0 556 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 SLC25A13Q9UJS0 675 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 DOLKQ9UPQ8 538 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 MAN2B2Q9Y2E5 1009 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 BTBD3Q9Y2F9 522 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 E7EQ34 232 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 YY2O15391 372 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 EPN2O95208 641 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 770.9 ms