RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 PRR35P0CG20 571 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 S100PP25815 95 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 ADRA1BP35368 520 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 RIDAP52758 137 aaKnown RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 EPHA5P54756 1037 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 EPS8Q12929 822 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 DGCR6Q14129 220 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 IRF3Q14653 427 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TCTE1Q5JU00 501 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 SEL1L3Q68CR1 1132 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 KIAA0930Q6ICG6 404 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 KDELC1Q6UW63 502 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 C17orf107Q6ZR85 190 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 ZC3HC1Q86WB0 502 aaKnown RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 RDH10Q8IZV5 341 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 GPR150Q8NGU9 434 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TUBGCP3Q96CW5 907 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 BBS4Q96RK4 519 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 KCTD15Q96SI1 283 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 NELL2Q99435 816 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 SLC22A4Q9H015 551 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 OR51M1Q9H341 326 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 RNF121Q9H920 327 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 CAB39LQ9H9S4 337 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 UFSP2Q9NUQ7 469 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 UBQLN2Q9UHD9 624 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 GPN3Q9UHW5 284 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 PIAS3Q9Y6X2 628 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 SCN8AQ9UQD0 1980 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TMEM82A0PJX8 343 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 CCDC78A2IDD5 438 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 CLDN24A6NM45 220 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 DNASE2O00115 360 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 DFFAO00273 331 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 CCNB2O95067 398 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 IFNA4P05014 189 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TPOP07202 933 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 NOS2P35228 1153 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 RFC2P35250 354 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 PREPP48147 710 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 KCNC1P48547 511 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 GABREP78334 506 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 CAP1Q01518 475 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 RIPPLY1Q0D2K3 151 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 MAB21L1Q13394 359 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 AP5B1Q2VPB7 878 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 PAN3Q58A45 887 aaKnown RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 ARMCX4Q5H9R4 360 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TOR1AIP1Q5JTV8 583 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TREML2Q5T2D2 321 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 GPR158Q5T848 1215 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TMEM198Q66K66 360 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 STRA8Q7Z7C7 330 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 CCDC190Q86UF4 302 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 SULF1Q8IWU6 871 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 OR6C4Q8NGE1 309 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 ZNF566Q969W8 418 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 MYRFLQ96LU7 910 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 MND1Q9BWT6 205 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 SORBS1Q9BX66 1292 aaKnown RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 GLIS2Q9BZE0 524 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 EVLQ9UI08 416 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 USTQ9Y2C2 406 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 KCNK7Q9Y2U2 307 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 RRN3P2A6NIE6 340 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 B4DXG7 233 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 IGHV2-70P01814 119 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 ALPLP05186 524 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 CD63P08962 238 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 PDGFRAP16234 1089 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 AGXTP21549 392 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 CTNNB1P35222 781 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 ADRA1AP35348 466 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 PSPHP78330 225 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 POU4F1Q01851 419 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 CHAF1BQ13112 559 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 EXOSC2Q13868 293 aaKnown RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 COL28A1Q2UY09 1125 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 CTU2Q2VPK5 515 aaKnown RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 FLYWCH1Q4VC44 716 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 PAN2Q504Q3 1202 aaKnown RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 ZC3H12BQ5HYM0 836 aaKnown RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 FAM102AQ5T9C2 384 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 HEATR6Q6AI08 1181 aaKnown RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 GLYATQ6IB77 296 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 SLC27A4Q6P1M0 643 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TBPL2Q6SJ96 375 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 GK5Q6ZS86 529 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 SYVN1Q86TM6 617 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 NLRP8Q86W28 1048 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 SLC22A9Q8IVM8 553 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TAB3Q8N5C8 712 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TTLL6Q8N841 843 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 AGR3Q8TD06 166 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 KIAA1191Q96A73 305 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 ATG4CQ96DT6 458 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 WBP1Q96G27 269 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 ZBTB45Q96K62 511 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 MRPL57Q9BQC6 102 aaKnown RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 STARD7Q9NQZ5 370 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms