RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 OR56A4Q8NGH8 313 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 OR5K1Q8NHB7 308 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 RHOXF1Q8NHV9 184 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 CCDC115Q96NT0 180 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 RHNO1Q9BSD3 238 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 TRIT1Q9H3H1 467 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 YBX2Q9Y2T7 364 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 IFT52Q9Y366 437 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 POLR3HQ9Y535 204 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 WNT6Q9Y6F9 365 aa16.74■□□□□ 0.27
SCAMP4-201ENST00000316097 GRXCR2A6NFK2 248 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 ARNTLO00327 626 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 CYP4B1P13584 511 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 RYKP34925 604 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 GRK3P35626 688 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 EIF2DP41214 584 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 MASP1P48740 699 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 SEPHS1P49903 392 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 HTR6P50406 440 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 IL1RL1Q01638 556 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 CLCA4Q14CN2 919 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 B3GNT8Q7Z7M8 397 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 PLD3Q8IV08 490 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 ADHFE1Q8IWW8 467 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 AADATQ8N5Z0 425 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 ZNF548Q8NEK5 533 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 ZNF566Q969W8 418 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 LRRC3BQ96PB8 259 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 IKZF5Q9H5V7 419 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 CPNE5Q9HCH3 593 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 TMEFF2Q9UIK5 374 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 SNPHO15079 494 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 CEBPBP17676 345 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 ACVR2AP27037 513 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 STC1P52823 247 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 SIM2Q14190 667 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 PLEKHG6Q3KR16 790 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 SETMARQ53H47 684 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 DGKKQ5KSL6 1271 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 LYSMD2Q8IV50 215 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 OR8J3Q8NGG0 315 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 OR4L1Q8NH43 312 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 NCLNQ969V3 563 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 CDKN2AIPNLQ96HQ2 116 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 TAS2R13Q9NYV9 303 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 NUAK1O60285 661 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 ZNF821O75541 412 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 RPP40O75818 363 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 DLGAP3O95886 979 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 MT-ND2P03891 347 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 IFITM2Q01629 132 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 CDC20Q12834 499 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 GPM6BQ13491 265 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 NR6A1Q15406 480 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 IL27RAQ6UWB1 636 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 POC5Q8NA72 575 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 DCAF4L2Q8NA75 395 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 MCFD2Q8NI22 146 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 RHBDF1Q96CC6 855 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 LGALS12Q96DT0 336 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 TXNDC15Q96J42 360 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 GPR21Q99679 349 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 C2orf49Q9BVC5 232 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 BBS2Q9BXC9 721 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 NDEL1Q9GZM8 345 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 HOXD1Q9GZZ0 328 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 PCDHB14Q9Y5E9 798 aa16.73■□□□□ 0.27
SCAMP4-201ENST00000316097 CXCR6O00574 342 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 STX16O14662 325 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 SLC16A6O15403 523 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 TBX1O43435 398 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 UPK1BO75841 260 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 NTRK1P04629 796 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 GSNP06396 782 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 ST13P50502 369 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 ERVPABLB-1P60509 514 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 NDUFA5Q16718 116 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 INO80DQ53TQ3 878 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 LAIR1Q6GTX8 287 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 CPXM2Q8N436 756 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 PAF1Q8N7H5 531 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 OR10Q1Q8NGQ4 319 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 GPR150Q8NGU9 434 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 FIBINQ8TAL6 211 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 ZNF707Q96C28 371 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 EID2BQ96D98 161 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 REXO5Q96IC2 774 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 SP140LQ9H930 580 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 HEBP1Q9NRV9 189 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 MED16Q9Y2X0 877 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 NOTCH4Q99466 2003 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 ELOVL7A1L3X0 281 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 C5orf67F2Z3F1 127 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 MAGP20916 626 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 SLC35A2P78381 396 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 ACVR1Q04771 509 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 CYP4F3Q08477 520 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 VAC14Q08AM6 782 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 LAPTM4AQ15012 233 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms