RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 MATN3O15232 486 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 EIF1AXP47813 144 aaKnown RBP15.14■□□□□ 0.01
HCFC1-201ENST00000310441 SLC9A3P48764 834 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 AQP4P55087 323 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 HFE2Q6ZVN8 426 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 UCK2Q9BZX2 261 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 HSBP1L1C9JCN9 74 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 ADH6P28332 368 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 CNPY1Q3B7I2 92 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 CFAP97Q9P2B7 532 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 RIMKLBQ9ULI2 386 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 LRRC42Q9Y546 428 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 FXYD6-FXYD2A0A087WZ82 144 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 DPPA5A6NC42 116 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 CFL1P23528 166 aaKnown RBP15.14■□□□□ 0.01
HCFC1-201ENST00000310441 CTBP2P56545 445 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 GNG2P59768 71 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 IL10RBQ08334 325 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 C12orf40Q86WS4 652 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 DQX1Q8TE96 717 aaKnown RBP15.14■□□□□ 0.01
HCFC1-201ENST00000310441 ORAI3Q9BRQ5 295 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 MRIQ9BWK5 157 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 FXYD6Q9H0Q3 95 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 TCRBV5S4A2TA0A5A2 114 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 H1F0P07305 194 aaKnown RBP15.13■□□□□ 0.01
HCFC1-201ENST00000310441 MAGP20916 626 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 SEMA3AQ14563 771 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 FAM84AQ96KN4 292 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 SPATA31D1Q6ZQQ2 1576 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 TRIM64CA6NLI5 447 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 SPATA31C2B4DYI2 1134 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 RAB5BP61020 215 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 PTGR1Q14914 329 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 SGCBQ16585 318 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 CIR1Q86X95 450 aaPredicted RBP15.13■□□□□ 0.01
HCFC1-201ENST00000310441 PBDC1Q9BVG4 233 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 SLC7A4O43246 635 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 AGXTP21549 392 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 ICAM3P32942 547 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 ACTR1BP42025 376 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 CD47Q08722 323 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 TUSC3Q13454 348 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 CCDC28AQ8IWP9 274 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 CLIP4Q8N3C7 705 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 TRIM43Q96BQ3 446 aaPredicted RBP15.13■□□□□ 0.01
HCFC1-201ENST00000310441 ZSCAN5AQ9BUG6 496 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 NUFIP1Q9UHK0 495 aaKnown RBP15.13■□□□□ 0.01
HCFC1-201ENST00000310441 LAMP5Q9UJQ1 280 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 H7C417 338 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 MT-ND5P03915 603 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 LRRC55Q6ZSA7 311 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 OR56A1Q8NGH5 318 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 RIPOR3Q96MK2 946 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 HAPLN3Q96S86 360 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 PCDHB18PQ96TA0 734 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 RGCCQ9H4X1 137 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 COPZ2Q9P299 210 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 C19orf25Q9UFG5 118 aaPredicted RBP15.13■□□□□ 0.01
HCFC1-201ENST00000310441 TREHO43280 583 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 IQCHQ86VS3 1027 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 MAB21L3Q8N8X9 362 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 OR5B12Q96R08 314 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 TMEM209Q96SK2 561 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 TM9SF2Q99805 663 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 SLC35A5Q9BS91 424 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 RAB9BQ9NP90 201 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 SLC39A1Q9NY26 324 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 LRRN3E7EW58 273 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 hCG_2039718K7EN88 272 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 BUD23O43709 281 aaKnown RBP15.13■□□□□ 0.01
HCFC1-201ENST00000310441 GJB6O95452 261 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 OR2T5Q6IEZ7 315 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 ZER1Q7Z7L7 766 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 OR2T29Q8NH02 315 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 TRAPPC12Q8WVT3 735 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 IL12RB2Q99665 862 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 FUZQ9BT04 418 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 BTBD1Q9H0C5 482 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 LRRN3Q9H3W5 708 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 CD93Q9NPY3 652 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 GABRDO14764 452 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 IRAK2O43187 625 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 EDNRAP25101 427 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 ADRA1BP35368 520 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 FKBP1BP68106 108 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 SP2Q02086 613 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 CYP2U1Q7Z449 544 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 ANKS1BQ7Z6G8 1248 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 MOAP1Q96BY2 351 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 ZFP57Q9NU63 452 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 CMAHPQ9Y471 501 aa15.13■□□□□ 0.01
HCFC1-201ENST00000310441 DLSTP36957 453 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 FSTL1Q12841 308 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 LRTOMTQ8WZ04 291 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 MAPKAP1Q9BPZ7 522 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 ADRB2P07550 413 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 CDK2P24941 298 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 NFE2L1Q14494 772 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 COL28A1Q2UY09 1125 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 GPR153Q6NV75 609 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms