RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 PEX13Q92968 403 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 EMID1Q96A84 441 aaPredicted RBP12.86□□□□□ -0.35
SNED1-201ENST00000310397 UFM1P61960 85 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 SLC51AQ86UW1 340 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 TMEM199Q8N511 208 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 TXNDC5Q8NBS9 432 aaKnown RBP12.86□□□□□ -0.35
SNED1-201ENST00000310397 ITPKCQ96DU7 683 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 SPACA7Q96KW9 195 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 ADAMTS6Q9UKP5 1117 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 OR2AG2A6NM03 316 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 CPSF4LA6NMK7 179 aaKnown RBP12.85□□□□□ -0.35
SNED1-201ENST00000310397 TLR4O00206 839 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 ITGB1P05556 798 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 PIGKQ92643 395 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 ACDQ96AP0 544 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 BRINP2Q9C0B6 783 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 FKBP7Q9Y680 259 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 DLGAP1O14490 977 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 ITPKBP27987 946 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 CMPK1P30085 196 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 IGFALSP35858 605 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 MAGEA8P43361 318 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 CHRNA4P43681 627 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 IRAK1BP1Q5VVH5 260 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 ZCCHC12Q6PEW1 402 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 C12orf66Q96MD2 445 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 NUP50Q9UKX7 468 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 MAP1BP46821 2468 aaKnown RBP12.85□□□□□ -0.35
SNED1-201ENST00000310397 ZNF432O94892 652 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 NRLP54845 237 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 UBAP2Q5T6F2 1119 aaKnown RBP12.85□□□□□ -0.35
SNED1-201ENST00000310397 LINGO4Q6UY18 593 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 CEP76Q8TAP6 659 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 IFT46Q9NQC8 304 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 FZD1Q9UP38 647 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 A0A1W2PRB8 838 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 ADAMTS3O15072 1205 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 APOL3O95236 402 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 IFI30P13284 250 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 DDX6P26196 483 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNED1-201ENST00000310397 MAGEA2P43356 314 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 SMARCD3Q6STE5 483 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 SLC22A17Q8WUG5 538 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 CDK15Q96Q40 435 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 IL4I1Q96RQ9 567 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 PHOX2BQ99453 314 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 EFCAB11Q9BUY7 163 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 RSPH9Q9H1X1 276 aaPredicted RBP12.85□□□□□ -0.35
SNED1-201ENST00000310397 TRIM36Q9NQ86 728 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 CMAHPQ9Y471 501 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 I3L521 148 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 ZNF701M0R085 212 aaPredicted RBP12.85□□□□□ -0.35
SNED1-201ENST00000310397 HLA-DPB1P04440 258 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 ECHS1P30084 290 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 GRIK2Q13002 908 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 DGKZQ13574 1117 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 OGFRL1Q5TC84 451 aaPredicted RBP12.85□□□□□ -0.35
SNED1-201ENST00000310397 ZSWIM3Q96MP5 696 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 LGR4Q9BXB1 951 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 OR51V1Q9H2C8 321 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 AURKAO14965 403 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 RAB36O95755 333 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 APOC1P02654 83 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 SLC35G6P0C7Q6 338 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 DGKQP52824 942 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 IGDCC3Q8IVU1 814 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 DENND1AQ8TEH3 1009 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 LIN28AQ9H9Z2 209 aaKnown RBP12.85□□□□□ -0.35
SNED1-201ENST00000310397 NEUROD4Q9HD90 331 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 C5P01031 1676 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 F8A1P23610 371 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 GABARAPL2P60520 117 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 TXNL4AP83876 142 aaKnown RBP12.85□□□□□ -0.35
SNED1-201ENST00000310397 NXPE1Q8N323 547 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 TOMM5Q8N4H5 51 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 ATAD1Q8NBU5 361 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 CCDC115Q96NT0 180 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 PADI3Q9ULW8 664 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 MEMO1Q9Y316 297 aa12.85□□□□□ -0.35
SNED1-201ENST00000310397 OR1F1O43749 312 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 GATBO75879 557 aaKnown RBP12.84□□□□□ -0.35
SNED1-201ENST00000310397 ALPPP05187 535 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 CFHP08603 1231 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 DSTNP60981 165 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 GAD2Q05329 585 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 TSTQ16762 297 aaKnown RBP12.84□□□□□ -0.35
SNED1-201ENST00000310397 TXLNGYQ9BZA5 131 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNED1-201ENST00000310397 TPST2O60704 377 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 EOMESO95936 686 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 MEP1AQ16819 746 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 XKR4Q5GH76 650 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 PIGGQ5H8A4 983 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
SNED1-201ENST00000310397 AQP11Q8NBQ7 271 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 ZNF548Q8NEK5 533 aaPredicted RBP12.84□□□□□ -0.35
SNED1-201ENST00000310397 SNIP1Q8TAD8 396 aaKnown RBP12.84□□□□□ -0.35
SNED1-201ENST00000310397 BCL7BQ9BQE9 202 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 GALPQ9UBC7 116 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 ANKRD36CQ5JPF3 1778 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms