RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PGRP06401 933 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 HSD3B1P14060 373 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TACR1P25103 407 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 HSD3B2P26439 372 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 GSK3BP49841 420 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 DDX39BQ13838 428 aaKnown RBP20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TRIP10Q15642 601 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TMPRSS11BQ86T26 416 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 DCUN1D3Q8IWE4 304 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 OR7G3Q8NG95 312 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 WDR34Q96EX3 536 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 DUS3LQ96G46 650 aaKnown RBP20.57■□□□□ 0.88
ATG4D-201ENST00000309469 FCRL1Q96LA6 429 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 PPM1MQ96MI6 270 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TMEM74Q96NL1 305 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 UHRF1Q96T88 793 aaPredicted RBP20.57■□□□□ 0.88
ATG4D-201ENST00000309469 CGREF1Q99674 301 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 ECSITQ9BQ95 431 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 ALG2Q9H553 416 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 BRF2Q9HAW0 419 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 PREBQ9HCU5 417 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 CCDC177Q9NQR7 707 aaPredicted RBP20.57■□□□□ 0.88
ATG4D-201ENST00000309469 LIMD1Q9UGP4 676 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 KCNH1O95259 989 aa20.56■□□□□ 0.88
ATG4D-201ENST00000309469 FUCA1P04066 466 aa20.56■□□□□ 0.88
ATG4D-201ENST00000309469 CLNS1AP54105 237 aaKnown RBP20.56■□□□□ 0.88
ATG4D-201ENST00000309469 MAPKAPK3Q16644 382 aa20.56■□□□□ 0.88
ATG4D-201ENST00000309469 LRRC36Q1X8D7 754 aa20.56■□□□□ 0.88
ATG4D-201ENST00000309469 CATSPEREQ5SY80 951 aa20.56■□□□□ 0.88
ATG4D-201ENST00000309469 GTF2H4Q92759 462 aa20.56■□□□□ 0.88
ATG4D-201ENST00000309469 TSSK3Q96PN8 268 aa20.56■□□□□ 0.88
ATG4D-201ENST00000309469 KLHL4Q9C0H6 718 aa20.56■□□□□ 0.88
ATG4D-201ENST00000309469 COPS7BQ9H9Q2 264 aaPredicted RBP20.56■□□□□ 0.88
ATG4D-201ENST00000309469 EGFL7Q9UHF1 273 aa20.56■□□□□ 0.88
ATG4D-201ENST00000309469 FZD4Q9ULV1 537 aa20.56■□□□□ 0.88
ATG4D-201ENST00000309469 SH2B3Q9UQQ2 575 aa20.56■□□□□ 0.88
ATG4D-201ENST00000309469 PI15O43692 258 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 RPN2P04844 631 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 C1GALT1C1LP0DN25 315 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 PCNAP12004 261 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 ATP6V1B2P21281 511 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 PEX2P28328 305 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 MAT2AP31153 395 aaKnown RBP20.55■□□□□ 0.88
ATG4D-201ENST00000309469 IGFALSP35858 605 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 PLIN5Q00G26 463 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 IER5LQ5T953 404 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 ATG9BQ674R7 924 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 MED27Q6P2C8 311 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 CHST15Q7LFX5 561 aaPredicted RBP20.55■□□□□ 0.88
ATG4D-201ENST00000309469 OR2T34Q8NGX1 318 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 SETD7Q8WTS6 366 aaKnown RBP20.55■□□□□ 0.88
ATG4D-201ENST00000309469 DNASE1L2Q92874 299 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 IL17FQ96PD4 163 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 KCTD14Q9BQ13 255 aaPredicted RBP20.55■□□□□ 0.88
ATG4D-201ENST00000309469 TRIM15Q9C019 465 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 ACTR3BQ9P1U1 418 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 RIMS3Q9UJD0 308 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 ACSL5Q9ULC5 683 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 PLAGL1Q9UM63 463 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 NCKAP1Q9Y2A7 1128 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 TDRKHQ9Y2W6 561 aaKnown RBP20.55■□□□□ 0.88
ATG4D-201ENST00000309469 AP4S1Q9Y587 144 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 MAGEB17A8MXT2 336 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 DMPKQ09013 629 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 ADNP2Q6IQ32 1131 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 USP30Q70CQ3 517 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 IFNEQ86WN2 208 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 LILRA2Q8N149 483 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 OR5K2Q8NHB8 316 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 HUS1BQ8NHY5 278 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 REPS1Q96D71 796 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 METTL2AQ96IZ6 378 aaKnown RBP20.55■□□□□ 0.88
ATG4D-201ENST00000309469 OR52E6Q96RD3 313 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 EFCAB11Q9BUY7 163 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 MUC13Q9H3R2 512 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 EHD1Q9H4M9 534 aa20.55■□□□□ 0.88
ATG4D-201ENST00000309469 TRPM6Q9BX84 2022 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 KANSL1LA0AUZ9 987 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 PEX1O43933 1283 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 CEACAM5P06731 702 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 SLC7A1P30825 629 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 GRIA3P42263 894 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 OGFRL1Q5TC84 451 aaPredicted RBP20.54■□□□□ 0.88
ATG4D-201ENST00000309469 LCN8Q6JVE9 175 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 CHRDL2Q6WN34 429 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 FAM124AQ86V42 546 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 PTRH1Q86Y79 214 aaKnown RBP20.54■□□□□ 0.88
ATG4D-201ENST00000309469 TMEM126BQ8IUX1 230 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 SLC5A11Q8WWX8 675 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 SLCO4A1Q96BD0 722 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 MRGPRX1Q96LB2 322 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 PKP2Q99959 881 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 APOOQ9BUR5 198 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 RMI1Q9H9A7 625 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 RUVBL1Q9Y265 456 aaKnown RBP20.54■□□□□ 0.88
ATG4D-201ENST00000309469 SLC17A4Q9Y2C5 497 aa20.54■□□□□ 0.88
ATG4D-201ENST00000309469 AQP12BA6NM10 295 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 SLC31A1O15431 190 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 SLC35G4P0C7Q5 338 aa20.53■□□□□ 0.88
ATG4D-201ENST00000309469 C7P10643 843 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms