RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 MAP2K7O14733 419 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 KIF1CO43896 1103 aaKnown RBP17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 STK16O75716 305 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 MPSTP25325 297 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 SLC6A12P48065 614 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 FOXK2Q01167 660 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 C16orf72Q14CZ0 275 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 PTCHD3Q3KNS1 767 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 ZC3H12BQ5HYM0 836 aaKnown RBP17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 SUSD1Q6UWL2 747 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 SRRM1Q8IYB3 904 aaKnown RBP17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 C2orf73Q8N5S3 287 aaPredicted RBP17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 TBC1D19Q8N5T2 526 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 RCBTB1Q8NDN9 531 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 RDH11Q8TC12 318 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 APOPT1Q96IL0 206 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 FCRL4Q96PJ5 515 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 SCNM1Q9BWG6 230 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 ASPSCR1Q9BZE9 553 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 SSU72Q9NP77 194 aaKnown RBP17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 ANGPTL2Q9UKU9 493 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 KNTC1P50748 2209 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 KRT87PA6NCN2 255 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 NCF1BA6NI72 391 aaPredicted RBP17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 SLC9B1P1A6NJY1 282 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 NCF1CA8MVU1 366 aaPredicted RBP17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 GOLGA8RI6L899 631 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 UBXN8O00124 270 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 CASC3O15234 703 aaKnown RBP17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 DXOO77932 396 aaKnown RBP17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 MTHFD2P13995 350 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 NCF1P14598 390 aaPredicted RBP17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 GRK3P35626 688 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 SEPHS1P49903 392 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 NFKB2Q00653 900 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 RTP5Q14D33 572 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 SETDB1Q15047 1291 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 FAM129CQ86XR2 697 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 SLC22A9Q8IVM8 553 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 SPNS2Q8IVW8 549 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 PPFIBP2Q8ND30 876 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 EXT2Q93063 718 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 DDA1Q9BW61 102 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 CD244Q9BZW8 370 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 ACBD3Q9H3P7 528 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 TMEM184CQ9NVA4 438 aa17.23■□□□□ 0.35
SSSCA1-201ENST00000309328 UQCRHLA0A096LP55 91 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 FAM149AA5PLN7 773 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 EFCAB7A8K855 629 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 KATNA1O75449 491 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 WDR47O94967 919 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 UQCRHP07919 91 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 EZRP15311 586 aaKnown RBP17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 ST6GAL1P15907 406 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 NPPBP16860 134 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 GNAZP19086 355 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 MAGP20916 626 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 RBMS1P29558 406 aaKnown RBP17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 GRIA3P42263 894 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 KCNC1P48547 511 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 MC2RQ01718 297 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 PCBP2Q15366 365 aaKnown RBP eCLIP17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 FIGLAQ6QHK4 219 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 CEACAM20Q6UY09 585 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 THOC6Q86W42 341 aaKnown RBP17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 ABHD11Q8NFV4 315 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 N4BP2L2Q92802 583 aaPredicted RBP17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 TAAR9Q96RI9 348 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 NRTNQ99748 197 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 PLCD4Q9BRC7 762 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 ACAT2Q9BWD1 397 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 PITHD1Q9GZP4 211 aaPredicted RBP17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 CENPHQ9H3R5 247 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 EHD1Q9H4M9 534 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 DNAJC11Q9NVH1 559 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 SIDT1Q9NXL6 827 aaKnown RBP17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 CPSF2Q9P2I0 782 aaKnown RBP17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 OPTCQ9UBM4 332 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 KLK13Q9UKR3 277 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 SATB2Q9UPW6 733 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 PCDHGA3Q9Y5H0 932 aa17.22■□□□□ 0.35
SSSCA1-201ENST00000309328 OR2A25A4D2G3 310 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 K7EPI3 171 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 TK2O00142 265 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 POLR1CO15160 346 aaPredicted RBP17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 SRPX2O60687 465 aaPredicted RBP17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 ATP5F1P24539 256 aaPredicted RBP17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 CXCR2P25025 360 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 CD82P27701 267 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 PSMB5P28074 263 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 GMPRP36959 345 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 CCR8P51685 355 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 CLDN6P56747 220 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 GABREP78334 506 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 CDC16Q13042 620 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 CAMK2BQ13554 666 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 PDK4Q16654 411 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 PFKFB4Q16877 469 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 TNFAIP8L3Q5GJ75 292 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 C3orf38Q5JPI3 329 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms