RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 SERPINA9Q86WD7 417 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 HRNRQ86YZ3 2850 aaPredicted RBP11.22□□□□□ -0.61
SMIM4-201ENST00000307106 RFX6Q8HWS3 928 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 MARVELD2Q8N4S9 558 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 TMEM178AQ8NBL3 297 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 SPATA3Q8NHX4 192 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 TFB1MQ8WVM0 346 aaKnown RBP11.22□□□□□ -0.61
SMIM4-201ENST00000307106 ELMO1Q92556 727 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 IMMP1LQ96LU5 166 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 ZNF354BQ96LW1 612 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 TUBB6Q9BUF5 446 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 FICDQ9BVA6 458 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 POLDIP3Q9BY77 421 aaKnown RBP11.22□□□□□ -0.61
SMIM4-201ENST00000307106 C14orf105Q9NVL8 296 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 ZNF358Q9NW07 568 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 RNF6Q9Y252 685 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 PLEKHA6Q9Y2H5 1048 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 FAM169AQ9Y6X4 670 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 C3orf70A6NLC5 250 aaPredicted RBP11.21□□□□□ -0.61
SMIM4-201ENST00000307106 CCL22O00626 93 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 PROM1O43490 865 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 CTAG2O75638 210 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 CRTAMO95727 393 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 EIF2S1P05198 315 aaKnown RBP11.21□□□□□ -0.61
SMIM4-201ENST00000307106 TPOP07202 933 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 ADSLP30566 484 aaPredicted RBP11.21□□□□□ -0.61
SMIM4-201ENST00000307106 MC4RP32245 332 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 CD96P40200 585 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 FASTKQ14296 549 aaKnown RBP11.21□□□□□ -0.61
SMIM4-201ENST00000307106 ACER2Q5QJU3 275 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 TMEM211Q6ICI0 200 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 SPINK14Q6IE38 97 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 TMEM205Q6UW68 189 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 NAPRTQ6XQN6 538 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.21□□□□□ -0.61
SMIM4-201ENST00000307106 VSIG1Q86XK7 387 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 ZNF567Q8N184 647 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 HDAC10Q969S8 669 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 ZUFSPQ96AP4 578 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 RMND5BQ96G75 393 aaPredicted RBP11.21□□□□□ -0.61
SMIM4-201ENST00000307106 C18orf12Q96KH6 178 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 C10orf90Q96M02 699 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 UTP23Q9BRU9 249 aaKnown RBP11.21□□□□□ -0.61
SMIM4-201ENST00000307106 MENTQ9BUN1 341 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 SAE1Q9UBE0 346 aaPredicted RBP11.21□□□□□ -0.61
SMIM4-201ENST00000307106 MKL2Q9ULH7 1088 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 EDARQ9UNE0 448 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 CDC14AQ9UNH5 594 aa11.21□□□□□ -0.61
SMIM4-201ENST00000307106 LOC105369274A0A096LPK9 316 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 TRBV5-4A0A0C4DH59 114 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 LOC102723532A0A0G2JNH3 316 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 A0A0J9YVX5 310 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 FAM237BA0A1B0GVD1 139 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 SLC5A10A0PJK1 596 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 TARM1B6A8C7 271 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 PRPF4O43172 522 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMIM4-201ENST00000307106 SEC24DO94855 1032 aaPredicted RBP11.2□□□□□ -0.62
SMIM4-201ENST00000307106 AP2A2O94973 939 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 PRSS56P0CW18 603 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 ZNF24P17028 368 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 PTGS2P35354 604 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 ARHGAP25P42331 645 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 ZNF140P52738 457 aaPredicted RBP11.2□□□□□ -0.62
SMIM4-201ENST00000307106 DGKQP52824 942 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 TAZQ16635 292 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 MEP1AQ16819 746 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 BTBD16Q32M84 506 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 SYTL3Q4VX76 610 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 H3F3CQ6NXT2 135 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 CLEC9AQ6UXN8 241 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 MICALCLQ6ZW33 695 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 BZW1Q7L1Q6 419 aaKnown RBP11.2□□□□□ -0.62
SMIM4-201ENST00000307106 CXXC5Q7LFL8 322 aaKnown RBP11.2□□□□□ -0.62
SMIM4-201ENST00000307106 TAS2R42Q7RTR8 314 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 CD163Q86VB7 1156 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 TMTC1Q8IUR5 882 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 CLYBLQ8N0X4 340 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 OR4N4Q8N0Y3 316 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 LRRN4CLQ8ND94 238 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 FAM57AQ8TBR7 257 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 RND1Q92730 232 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 ARSGQ96EG1 525 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 CABS1Q96KC9 395 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 IL17FQ96PD4 163 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 VAT1Q99536 393 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 APOL2Q9BQE5 337 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 HSD3B7Q9H2F3 369 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 LRFN1Q9P244 771 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 CTTNBP2NLQ9P2B4 639 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 CIDEBQ9UHD4 219 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 RSPH14Q9UHP6 348 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 GNPTGQ9UJJ9 305 aa11.2□□□□□ -0.62
SMIM4-201ENST00000307106 A0A087X0T9 212 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 IGHV3-20A0A0C4DH32 117 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 KLK8O60259 260 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 FTH1P02794 183 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 SP1P08047 785 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 INHBBP09529 407 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 FAM228BP0C875 321 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 C8orf89P0DMQ9 161 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms