RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 GALTP07902 379 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 DNAJA1P31689 397 aaKnown RBP15.54■□□□□ 0.08
USP42-201ENST00000306177 DGKQP52824 942 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 CASP9P55211 416 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 PPP2R2BQ00005 443 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 DMPKQ09013 629 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 AKAP14Q86UN6 197 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 CAND1Q86VP6 1230 aaKnown RBP15.54■□□□□ 0.08
USP42-201ENST00000306177 TMEM145Q8NBT3 493 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 DSN1Q9H410 356 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 SMURF2Q9HAU4 748 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 MMP20O60882 483 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 SLC10A3P09131 477 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 NR4A1P22736 598 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 PRSS58Q8IYP2 241 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 TFGQ92734 400 aaPredicted RBP15.54■□□□□ 0.08
USP42-201ENST00000306177 COL21A1Q96P44 957 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 RPL36Q9Y3U8 105 aaKnown RBP15.54■□□□□ 0.08
USP42-201ENST00000306177 A0A0D9SEW6 157 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 ZNF99A8MXY4 864 aaPredicted RBP15.54■□□□□ 0.08
USP42-201ENST00000306177 TBX10O75333 385 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 PTCHD3Q3KNS1 767 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 UBAP2Q5T6F2 1119 aaKnown RBP15.54■□□□□ 0.08
USP42-201ENST00000306177 SLC8B1Q6J4K2 584 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 GRASPQ7Z6J2 395 aaPredicted RBP15.54■□□□□ 0.08
USP42-201ENST00000306177 MEIOBQ8N635 442 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 CAMKVQ8NCB2 501 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 RAB2BQ8WUD1 216 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 C1QTNF1Q9BXJ1 281 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 CLDND1Q9NY35 253 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 MOCS1Q9NZB8 636 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 CDH7Q9ULB5 785 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 H0YGN5 161 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 NDUFS4O43181 175 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 OAS1P00973 400 aaKnown RBP15.54■□□□□ 0.08
USP42-201ENST00000306177 RPLP0P05388 317 aaKnown RBP15.54■□□□□ 0.08
USP42-201ENST00000306177 CLCN7P51798 805 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 DNAJB13P59910 316 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 RING1Q06587 406 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 IQCCQ4KMZ1 466 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 SLC2A7Q6PXP3 512 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 ZNF783Q6ZMS7 281 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 SATL1Q86VE3 508 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 TUBGCP5Q96RT8 1024 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 PIGUQ9H490 435 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 PSAT1Q9Y617 370 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 NFS1Q9Y697 457 aa15.54■□□□□ 0.08
USP42-201ENST00000306177 PRMT3O60678 531 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 ZNF623O75123 536 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 CHRNA1P02708 482 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 DNASE1L1P49184 302 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 UFM1P61960 85 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 WDTC1Q8N5D0 677 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 GEMIN6Q8WXD5 167 aaKnown RBP15.53■□□□□ 0.08
USP42-201ENST00000306177 HTRA1Q92743 480 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 SLC39A3Q9BRY0 314 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 FBXL12Q9NXK8 326 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 C4BP0C0L5 1744 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 MYH13Q9UKX3 1938 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 A0A1W2PP18 115 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 IFNA6P05013 189 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 GDF5P43026 501 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 TGFBIQ15582 683 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 GPRC6AQ5T6X5 926 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 AGTRAPQ6RW13 159 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 PJA1Q8NG27 643 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 OR10H4Q8NGA5 316 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 RIT1Q92963 219 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 OR51V1Q9H2C8 321 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 RETREG1Q9H6L5 497 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 MKKSQ9NPJ1 570 aaPredicted RBP15.53■□□□□ 0.08
USP42-201ENST00000306177 TRPV5Q9NQA5 729 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 COCHO43405 550 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 TNFP01375 233 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 RLN1P04808 185 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 CKMT2P17540 419 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 GSK3BP49841 420 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 UFD1Q92890 307 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 EFHD2Q96C19 240 aaPredicted RBP15.53■□□□□ 0.08
USP42-201ENST00000306177 CTPS2Q9NRF8 586 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 FARSBQ9NSD9 589 aaKnown RBP15.53■□□□□ 0.08
USP42-201ENST00000306177 OAZ3Q9UMX2 235 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 GOLGA4Q13439 2230 aaKnown RBP15.53■□□□□ 0.08
USP42-201ENST00000306177 SOCS5O75159 536 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 PRKD3O94806 890 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 PGRP06401 933 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 GALK1P51570 392 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 ZNF678Q5SXM1 525 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 OR5AK3PQ8NH89 298 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 PMEPA1Q969W9 287 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 TP53INP1Q96A56 240 aa15.53■□□□□ 0.08
USP42-201ENST00000306177 GPN1Q9HCN4 374 aaPredicted RBP15.53■□□□□ 0.08
USP42-201ENST00000306177 ZNF865P0CJ78 1059 aaPredicted RBP15.52■□□□□ 0.08
USP42-201ENST00000306177 ATP5A1P25705 553 aaKnown RBP15.52■□□□□ 0.08
USP42-201ENST00000306177 SEPHS1P49903 392 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 DSC3Q14574 896 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 C5orf22Q49AR2 442 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 RNASE12Q5GAN4 147 aaKnown RBP15.52■□□□□ 0.08
USP42-201ENST00000306177 LY6G5CQ5SRR4 150 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 PHTF2Q8N3S3 785 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms