RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 PCDHB3Q9Y5E6 796 aa6.34□□□□□ -1.39
USP47-201ENST00000305481 CROCCQ5TZA2 2017 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 TRPM6Q9BX84 2022 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 A0A1W2PP55 124 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 FAM149AA5PLN7 773 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 MGAT4DA6NG13 374 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 MAGEB17A8MXT2 336 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 DENRO43583 198 aaKnown RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 AP1G1O43747 822 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 LRATO95237 230 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 FUCA1P04066 466 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 PCCBP05166 539 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 PRPS2P11908 318 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 BMP2P12643 396 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 CKMT2P17540 419 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 MAPK9P45984 424 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 SEC13P55735 322 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 TBPL1P62380 186 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 CDK3Q00526 305 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 TAP2Q03519 686 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 MED21Q13503 144 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 GK3PQ14409 553 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 NRF1Q16656 503 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 TBCELQ5QJ74 424 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 OR52E8Q6IFG1 317 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 DOK6Q6PKX4 331 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 ERMP1Q7Z2K6 904 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 TRMT11Q7Z4G4 463 aaKnown RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 GOLM1Q8NBJ4 401 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 PHC3Q8NDX5 983 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 OR7G3Q8NG95 312 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 GFM2Q969S9 779 aaKnown RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 EME1Q96AY2 570 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 BIRC7Q96CA5 298 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 ZNF514Q96K75 400 aaPredicted RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 MAGEB10Q96LZ2 347 aaPredicted RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 CIB1Q99828 191 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 GDF15Q99988 308 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 SGPP1Q9BX95 441 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 EBPLQ9BY08 206 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 TRIM15Q9C019 465 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 MKRN2Q9H000 416 aaKnown RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 SLC6A17Q9H1V8 727 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 AGPAT4Q9NRZ5 378 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 DLGAP2Q9P1A6 1054 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 VPS29Q9UBQ0 182 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 CNOT11Q9UKZ1 510 aaKnown RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 ERVK-11Q9UQG0 969 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 TMED5Q9Y3A6 229 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 PCDHB14Q9Y5E9 798 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 MAGEA13PA6NCF6 341 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 PCDH8O95206 1070 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 PIM1P11309 404 aaPredicted RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 ACPPP15309 386 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 TIE1P35590 1138 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 CDKN2CP42773 168 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 RAE1P78406 368 aaKnown RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 PRKCQQ04759 706 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 CSTF3Q12996 717 aaKnown RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 DDX39BQ13838 428 aaKnown RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 CYP51A1Q16850 503 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 RUNDC3AQ59EK9 446 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 UGT2A3Q6UWM9 527 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 ANKRD46Q86W74 232 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 SYTL1Q8IYJ3 562 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 HDDC3Q8N4P3 179 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 ANKFN1Q8N957 763 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 CATSPER1Q8NEC5 780 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 OR9A1PQ8NGU1 263 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 HUS1BQ8NHY5 278 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 HM13Q8TCT9 377 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 TESCQ96BS2 214 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 MUC13Q9H3R2 512 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 DPEP2Q9H4A9 486 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 SGK2Q9HBY8 427 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 OR1A2Q9Y585 309 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 F5P12259 2224 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 YY2O15391 372 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 AKAP10O43572 662 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 TPST1O60507 370 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 SH3BGRLO75368 114 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 STAMBPO95630 424 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 ZCCHC18P0CG32 403 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 C5AR1P21730 350 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 HNF4AP41235 474 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 GTF2H3Q13889 308 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 INPP5AQ14642 412 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 PDK3Q15120 406 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 PYCR3Q53H96 274 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 LRIF1Q5T3J3 769 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 C6orf52Q5T4I8 152 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 GLYATQ6IB77 296 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 EPHX4Q8IUS5 362 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 PHACTR4Q8IZ21 702 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 PAPD5Q8NDF8 572 aaKnown RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 TRPV3Q8NET8 790 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 OR5AR1Q8NGP9 310 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 OR10A6Q8NH74 314 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 PPWD1Q96BP3 646 aaKnown RBP6.33□□□□□ -1.4
USP47-201ENST00000305481 AURKBQ96GD4 344 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms