RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 DYRK1BQ9Y463 629 aa21.56■■□□□ 1.04
SMAD1-201ENST00000302085 KANSL1LA0AUZ9 987 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 LATO43561 262 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 GABRG2P18507 467 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 TRAP1Q12931 704 aaKnown RBP21.55■■□□□ 1.04
SMAD1-201ENST00000302085 DDX39BQ13838 428 aaKnown RBP21.55■■□□□ 1.04
SMAD1-201ENST00000302085 TMEM31Q5JXX7 168 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 TMPRSS11BQ86T26 416 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 OR7G3Q8NG95 312 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 DNAJB14Q8TBM8 379 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 SETD7Q8WTS6 366 aaKnown RBP21.55■■□□□ 1.04
SMAD1-201ENST00000302085 TMEM125Q96AQ2 219 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 TIMM29Q9BSF4 260 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 TRIM8Q9BZR9 551 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 CLMPQ9H6B4 373 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 BCAP29Q9UHQ4 241 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 SUFUQ9UMX1 484 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 PCDHGA11Q9Y5H2 935 aa21.55■■□□□ 1.04
SMAD1-201ENST00000302085 POM121BA6NF01 834 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 CACNB4O00305 520 aaPredicted RBP21.54■■□□□ 1.04
SMAD1-201ENST00000302085 C1GALT1C1LP0DN25 315 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 PRPS2P11908 318 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 TACR1P25103 407 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 VHLP40337 213 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 CLDN8P56748 225 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 CLDN2P57739 230 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 C6orf10Q5SRN2 563 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 DLEU7Q6UYE1 221 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 KIAA2013Q8IYS2 634 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 C2orf73Q8N5S3 287 aaPredicted RBP21.54■■□□□ 1.04
SMAD1-201ENST00000302085 GLB1L3Q8NCI6 653 aaPredicted RBP21.54■■□□□ 1.04
SMAD1-201ENST00000302085 SCARF2Q96GP6 870 aaPredicted RBP21.54■■□□□ 1.04
SMAD1-201ENST00000302085 APOLD1Q96LR9 279 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 INSM2Q96T92 566 aaPredicted RBP21.54■■□□□ 1.04
SMAD1-201ENST00000302085 CCDC177Q9NQR7 707 aaPredicted RBP21.54■■□□□ 1.04
SMAD1-201ENST00000302085 KCNK6Q9Y257 313 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 TMED5Q9Y3A6 229 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 PRR19A6NJB7 356 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 SOX1O00570 391 aaPredicted RBP21.54■■□□□ 1.04
SMAD1-201ENST00000302085 NPPAP01160 153 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 SLC35G4P0C7Q5 338 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 TFF2Q03403 129 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 SFSWAPQ12872 951 aaKnown RBP21.54■■□□□ 1.04
SMAD1-201ENST00000302085 ATG9BQ674R7 924 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 FCRL1Q96LA6 429 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 GEMIN8Q9NWZ8 242 aaKnown RBP21.54■■□□□ 1.04
SMAD1-201ENST00000302085 VPS29Q9UBQ0 182 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 MOSPD1Q9UJG1 213 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 NDRG2Q9UN36 371 aaKnown RBP21.54■■□□□ 1.04
SMAD1-201ENST00000302085 CA5BQ9Y2D0 317 aa21.54■■□□□ 1.04
SMAD1-201ENST00000302085 PI15O43692 258 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 DNAJA2O60884 412 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 ERGP11308 486 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 PCNAP12004 261 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 SDC1P18827 310 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 SKIV2LQ15477 1246 aaKnown RBP21.53■■□□□ 1.04
SMAD1-201ENST00000302085 FAM174BQ3ZCQ3 159 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 RABL3Q5HYI8 236 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 NOXRED1Q6NXP6 359 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 DUS1LQ6P1R4 473 aaKnown RBP21.53■■□□□ 1.04
SMAD1-201ENST00000302085 NXPE4Q6UWF7 544 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 DHDDSQ86SQ9 333 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 TRIM69Q86WT6 500 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 HUS1BQ8NHY5 278 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 SLC5A11Q8WWX8 675 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 OSGEPL1Q9H4B0 414 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 SLC2A4RGQ9NR83 387 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 EBF1Q9UH73 591 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 GPSM3Q9Y4H4 160 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 LRRC42Q9Y546 428 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 TRIOBPQ9H2D6 2365 aa21.53■■□□□ 1.04
SMAD1-201ENST00000302085 MAGEB17A8MXT2 336 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 ETHE1O95571 254 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 RPN2P04844 631 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 HOXC4P09017 264 aaPredicted RBP21.52■■□□□ 1.04
SMAD1-201ENST00000302085 HSD3B1P14060 373 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 HSD17B1P14061 328 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 ACPPP15309 386 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 HSD3B2P26439 372 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 MAPK1P28482 360 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 MRPS22P82650 360 aaKnown RBP21.52■■□□□ 1.04
SMAD1-201ENST00000302085 SPANXN4Q5MJ08 99 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 NANOGP8Q6NSW7 305 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 MED27Q6P2C8 311 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 MSANTD3Q96H12 275 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 MENTQ9BUN1 341 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 TRIT1Q9H3H1 467 aaKnown RBP21.52■■□□□ 1.04
SMAD1-201ENST00000302085 EHD1Q9H4M9 534 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 NANOGQ9H9S0 305 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 BRF2Q9HAW0 419 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 FGF22Q9HCT0 170 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 COLQQ9Y215 455 aaPredicted RBP21.52■■□□□ 1.04
SMAD1-201ENST00000302085 IL6P05231 212 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 SRFP11831 508 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 PWP1Q13610 501 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 SLBPQ14493 270 aaKnown RBP eCLIP21.52■■□□□ 1.04
SMAD1-201ENST00000302085 ARHGAP19Q14CB8 494 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 MLF2Q15773 248 aaPredicted RBP21.52■■□□□ 1.04
SMAD1-201ENST00000302085 CYP2A13Q16696 494 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 THEMIS2Q5TEJ8 643 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms