RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 MAPK1P28482 360 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 UFM1P61960 85 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 LAPTM5Q13571 262 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 RCAN2Q14206 197 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 SNCBQ16143 134 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 CYP2A13Q16696 494 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 HIST2H2ACQ16777 129 aaPredicted RBP15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 COQ5Q5HYK3 327 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 HIST2H2AA3Q6FI13 130 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 CYP20A1Q6UW02 462 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 HACD2Q6Y1H2 254 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 BNC2Q6ZN30 1099 aaPredicted RBP15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 Q6ZSR6 202 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 NET1Q7Z628 596 aaPredicted RBP15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 ABI3BPQ7Z7G0 1075 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 FAM9CQ8IZT9 166 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 WDR20Q8TBZ3 569 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 SLC5A11Q8WWX8 675 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 ROPN1LQ96C74 230 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 BIRC7Q96CA5 298 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 WDR34Q96EX3 536 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 CMTM7Q96FZ5 175 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 IL17FQ96PD4 163 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 RAB11FIP5Q9BXF6 653 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 MVB12BQ9H7P6 319 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 BRF2Q9HAW0 419 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 C2orf42Q9NWW7 574 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 SLC7A8Q9UHI5 535 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 TMED5Q9Y3A6 229 aa15.2■□□□□ 0.02
HERPUD1-201ENST00000300302 C1GALT1C1LP0DN25 315 aa15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 POLR2JP52435 117 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 SRP54P61011 504 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 TRMT5Q32P41 509 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 VPS26BQ4G0F5 336 aa15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 MED27Q6P2C8 311 aa15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 RD3Q7Z3Z2 195 aa15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 UBALD2Q8IYN6 164 aa15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 FBXW8Q8N3Y1 598 aa15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 SMPDL3AQ92484 453 aa15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 SH3KBP1Q96B97 665 aa15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 SPDL1Q96EA4 605 aa15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 ZBTB18Q99592 522 aa15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 EBF2Q9HAK2 575 aa15.19■□□□□ 0.02
HERPUD1-201ENST00000300302 A0A1W2PP18 115 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 CCDC154A6NI56 674 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 JAK1P23458 1154 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 VARSP26640 1264 aaKnown RBP15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 CLCA4Q14CN2 919 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 C1orf146Q5VVC0 180 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 DUS1LQ6P1R4 473 aaKnown RBP15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 PGM2L1Q6PCE3 622 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 NXPE4Q6UWF7 544 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 WASH2PQ6VEQ5 465 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 GJD3Q8N144 294 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 FAM174AQ8TBP5 190 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 PROKR1Q8TCW9 393 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 UBE2E3Q969T4 207 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 TSACCQ96A04 125 aaPredicted RBP15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 TPSD1Q9BZJ3 242 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 PRM3Q9NNZ6 103 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 WASH6PQ9NQA3 447 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 PRDM8Q9NQV8 689 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 VPS29Q9UBQ0 182 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 COLEC10Q9Y6Z7 277 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 STK25O00506 426 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 CFLARO15519 480 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 PRPS2P11908 318 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 PCNAP12004 261 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 ACPPP15309 386 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 CAPN3P20807 821 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 HNRNPH1P31943 449 aaKnown RBP15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 MTTPP55157 894 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 KPNB1Q14974 876 aaKnown RBP15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 CATSPEREQ5SY80 951 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 TPRG1LQ5T0D9 272 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 LIX1Q8N485 282 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 OR7G3Q8NG95 312 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 METTL2AQ96IZ6 378 aaKnown RBP15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 TEX37Q96LM6 180 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 CAMK1GQ96NX5 476 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 CDRT15Q96T59 188 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 MTERF1Q99551 399 aaKnown RBP15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 MENTQ9BUN1 341 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 TBC1D17Q9HA65 648 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 GID8Q9NWU2 228 aa15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 TRNAU1APQ9NX07 287 aaKnown RBP15.18■□□□□ 0.02
HERPUD1-201ENST00000300302 IGHV1OR15-9A0A0B4J2B8 117 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 A0A1W2PPC4 97 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 SCAMP1O15126 338 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 NDUFS2O75306 463 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 RASGRP1O95267 797 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 LMNAP02545 664 aaKnown RBP15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 MTHFD1P11586 935 aaKnown RBP15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 RAB28P51157 221 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 PSME3P61289 254 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 DDX39BQ13838 428 aaKnown RBP15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 SLBPQ14493 270 aaKnown RBP eCLIP15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 KIAA0040Q15053 153 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 RPE65Q16518 533 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 ALG11Q2TAA5 492 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms