RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 TLR8Q9NR97 1041 aaKnown RBP11.11□□□□□ -0.63
TRUB1-201ENST00000298746 FAM105AQ9NUU6 356 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 STMN3Q9NZ72 180 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 MARCH2Q9P0N8 246 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 PRELID1Q9Y255 219 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 AP3M1Q9Y2T2 418 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 PCDHGB1Q9Y5G3 927 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 A0A0D9SEW6 157 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 CLIC1O00299 241 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 SCAMP3O14828 347 aaKnown RBP11.11□□□□□ -0.63
TRUB1-201ENST00000298746 CTPS1P17812 591 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 ENGP17813 658 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 KIR3DL1P43629 444 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 CXCR4P61073 352 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 ABHD18Q0P651 414 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 E2F2Q14209 437 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 MFSD10Q14728 455 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 FAM151BQ6UXP7 276 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 UMODL1-AS1Q8N2C9 162 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 FBXO32Q969P5 355 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 NECTIN4Q96NY8 510 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 DNAJC25-GNG10A0A024R161 153 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 SMIM35A0A1B0GVV1 85 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 TNFRSF11BO00300 401 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 FPGTO14772 594 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 GRK4P32298 578 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 HTR2BP41595 481 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 IL10RBQ08334 325 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 ZC3H12BQ5HYM0 836 aaKnown RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 ATG9BQ674R7 924 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 MBOAT1Q6ZNC8 495 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 GALNT7Q86SF2 657 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 SYT12Q8IV01 421 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 C10orf111Q8N326 155 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 CD200R1Q8TD46 325 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 GTPBP3Q969Y2 492 aaKnown RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 MTERF3Q96E29 417 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 MAGIXQ9H6Y5 334 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 RANGRFQ9HD47 186 aaPredicted RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 CFL2Q9Y281 166 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 SCN4AP35499 1836 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 A0A1W2PQ72 361 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 ARL5CA6NH57 179 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 SUV39H1O43463 412 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 SNX4O95219 450 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 YES1P07947 543 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 COX7A2P14406 83 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 JUNDP17535 347 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 TNFRSF1BP20333 461 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 HTR7P34969 479 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 TIE1P35590 1138 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 GPR15P49685 360 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 CDH12P55289 794 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 OLR1P78380 273 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 SPIBQ01892 262 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 GBX1Q14549 363 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 CYP27C1Q4G0S4 372 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 SUSD1Q6UWL2 747 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 RFPL4BQ6ZWI9 263 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 BHLHA9Q7RTU4 235 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 CYP4Z2PQ8N1L4 340 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 OR9Q1Q8NGQ5 310 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 VANGL1Q8TAA9 524 aaPredicted RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 DACT3Q96B18 629 aaPredicted RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 FYTTD1Q96QD9 318 aaKnown RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 FEVQ99581 238 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 KATNAL1Q9BW62 490 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 OLA1Q9NTK5 396 aaKnown RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 QPCTLQ9NXS2 382 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 ARL15Q9NXU5 204 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 GPRC5BQ9NZH0 403 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 UBA2Q9UBT2 640 aaPredicted RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 PRG3Q9Y2Y8 225 aaPredicted RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 NAALAD2Q9Y3Q0 740 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 DNMT3AQ9Y6K1 912 aaPredicted RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 LOC285095A0A1B0GVY8 99 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 F5H5T6 163 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 EIF3FO00303 357 aaPredicted RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 ANKRD28O15084 1053 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 SLITRK5O94991 958 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 CDKN2CP42773 168 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 HTR3AP46098 478 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 UGT2B15P54855 530 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 SNRPD2P62316 118 aaKnown RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 LRRC74AQ0VAA2 488 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 TTC23LQ6PF05 361 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 EIF3MQ7L2H7 374 aaKnown RBP11.1□□□□□ -0.63
TRUB1-201ENST00000298746 SNX20Q7Z614 316 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 SCD5Q86SK9 330 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 ENTHD1Q8IYW4 607 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 IL17RDQ8NFM7 739 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 OR10T2Q8NGX3 314 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 GRPEL2Q8TAA5 225 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 ZNF566Q969W8 418 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 EGLN2Q96KS0 407 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 ACBD6Q9BR61 282 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 IL1RAPQ9NPH3 570 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 ST3GAL5Q9UNP4 418 aa11.1□□□□□ -0.63
TRUB1-201ENST00000298746 H3BM21 787 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms