RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 BCKDKO14874 412 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 NME6O75414 186 aaPredicted RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 AP2A1O95782 977 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 HK1P19367 917 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 GLDCP23378 1020 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 HACD2Q6Y1H2 254 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 SLC26A9Q7LBE3 791 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 AMIGO2Q86SJ2 522 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 OR4K2Q8NGD2 314 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 OR56B2PQ8NGI1 322 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 LNX1Q8TBB1 728 aaPredicted RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 SUN5Q8TC36 379 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 MAGEH1Q9H213 219 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 PDP1Q9P0J1 537 aaPredicted RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 CYP3A5P20815 502 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 PAQR7Q86WK9 346 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 PHTF2Q8N3S3 785 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 LENG1Q96BZ8 264 aaPredicted RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 TSSK3Q96PN8 268 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 FBRSQ9HAH7 460 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 DUS2Q9NX74 493 aaKnown RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 IRF6O14896 467 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 FABP3P05413 133 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 ACSL1P33121 698 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 ADAM17P78536 824 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 GLB1L3Q8NCI6 653 aaPredicted RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 ELMO3Q96BJ8 720 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 APOLD1Q96LR9 279 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 NPAS2Q99743 824 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 GBA3Q9H227 469 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 RAB26Q9ULW5 256 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 RAI2Q9Y5P3 530 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 A0A1B0GVM2 712 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 TCAF2A6NFQ2 919 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 POP4O95707 220 aaKnown RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 HYAL2Q12891 473 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 RGMBQ6NW40 437 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 FAM83HQ6ZRV2 1179 aaPredicted RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 USP51Q70EK9 711 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 ABHD13Q7L211 337 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 ZNF808Q8N4W9 903 aaPredicted RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 UFD1Q92890 307 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 FAXDC2Q96IV6 333 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 SEZ6LQ9BYH1 1024 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 NOL11Q9H8H0 719 aaKnown RBP11.81□□□□□ -0.52
PCF11-201ENST00000298281 GHRLQ9UBU3 117 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 MYH7BA7E2Y1 1941 aa11.81□□□□□ -0.52
PCF11-201ENST00000298281 ILVBLA1L0T0 632 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 SGCEO43556 437 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 SCELO95171 688 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 SFTPBP07988 381 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 GLP1RP43220 463 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 TAF10Q12962 218 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 DUSP28Q4G0W2 176 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 EIPR1Q53HC9 387 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 DEFB119Q8N690 84 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 HSD17B14Q9BPX1 270 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 CD84Q9UIB8 345 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 TRIP11Q15643 1979 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 A0A1W2PPL8 197 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 NPEPPSL1A6NEC2 478 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 PRAMEF12O95522 483 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 LPLP06858 475 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 C8GP07360 202 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 RAC2P15153 192 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 PRDX6P30041 224 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 ZNF41P51814 821 aaPredicted RBP11.8□□□□□ -0.52
PCF11-201ENST00000298281 KCNJ2P63252 427 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 FAM189A2Q15884 450 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 LIX1LQ8IVB5 337 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 PKP4Q99569 1192 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 TEX51A0A1B0GUA7 166 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 TNFRSF11BO00300 401 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 SYN3O14994 580 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 CLEC3BP05452 202 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 FUT4P22083 530 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 SPATA6LQ8N4H0 392 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 IL22RA1Q8N6P7 574 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 C12orf29Q8N999 325 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 FAM47BQ8NA70 645 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 BBS1Q8NFJ9 593 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 RAB11FIP5Q9BXF6 653 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 ZNF180Q9UJW8 692 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 PACSIN3Q9UKS6 424 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 TISP43B9A030 160 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 MT-ND5P03915 603 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 EDNRAP25101 427 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 PBX3P40426 434 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 C6orf183Q5T699 404 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 VITQ6UXI7 678 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 ZNF572Q7Z3I7 529 aaPredicted RBP11.8□□□□□ -0.52
PCF11-201ENST00000298281 PGAM4Q8N0Y7 254 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 SVOPLQ8N434 492 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 MND1Q9BWT6 205 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 SLC25A51Q9H1U9 297 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 RMI1Q9H9A7 625 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 PAPSS1O43252 624 aaPredicted RBP11.8□□□□□ -0.52
PCF11-201ENST00000298281 CORO1AP31146 461 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms