RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 MAD2L1Q13257 205 aaPredicted RBP11.41□□□□□ -0.58
RHO-201ENST00000296271 PMS2P3Q13401 168 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 SYTL3Q4VX76 610 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 FAM98BQ52LJ0 330 aaKnown RBP11.41□□□□□ -0.58
RHO-201ENST00000296271 ARHGAP15Q53QZ3 475 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 ZNF805Q5CZA5 627 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 PLEKHS1Q5SXH7 462 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 SPESP1Q6UW49 350 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 NECAB2Q7Z6G3 386 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 PLPP6Q8IY26 295 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 PACRGLQ8N7B6 248 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 GOLM1Q8NBJ4 401 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 DDHD1Q8NEL9 900 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 ASZ1Q8WWH4 475 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 GLYATL1Q969I3 302 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 AMBRA1Q9C0C7 1298 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 OR2AG1Q9H205 316 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 SPNS1Q9H2V7 528 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 MUC13Q9H3R2 512 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 PLAGL1Q9UM63 463 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 MRPS23Q9Y3D9 190 aaKnown RBP11.41□□□□□ -0.58
RHO-201ENST00000296271 PCM1Q15154 2024 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 MYO15AQ9UKN7 3530 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 DYTNA2CJ06 578 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 RFXANKO14593 260 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 MMP20O60882 483 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 MITFO75030 526 aaPredicted RBP11.41□□□□□ -0.58
RHO-201ENST00000296271 WNT3P56703 355 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 NEDD8Q15843 81 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 LRRC23Q53EV4 343 aaPredicted RBP11.41□□□□□ -0.58
RHO-201ENST00000296271 TMEM240Q5SV17 173 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 XKR5Q6UX68 686 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 VTCN1Q7Z7D3 282 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 KIAA0907Q7Z7F0 614 aaPredicted RBP11.41□□□□□ -0.58
RHO-201ENST00000296271 SYT12Q8IV01 421 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 CFAP206Q8IYR0 622 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 ZFAND2BQ8WV99 257 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 OSCP1Q8WVF1 389 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 NEIL2Q969S2 332 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 ARRDC3Q96B67 414 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 SH3KBP1Q96B97 665 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 BDH2Q9BUT1 245 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 TOR3AQ9H497 397 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 SLC8A2Q9UPR5 921 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 DMTF1Q9Y222 760 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 IRAK3Q9Y616 596 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 NUMA1Q14980 2115 aa11.41□□□□□ -0.58
RHO-201ENST00000296271 LINC01553A4QN01 128 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 ZNF682O95780 498 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 MPC1LP0DKB6 136 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 FCGR1AP12314 374 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 JUPP14923 745 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 COL9A2Q14055 689 aaPredicted RBP11.4□□□□□ -0.58
RHO-201ENST00000296271 HKDC1Q2TB90 917 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 CRTC3Q6UUV7 619 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 B3GNT6Q6ZMB0 384 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 ZNF621Q6ZSS3 439 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 LPCAT2Q7L5N7 544 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 TRAM1L1Q8N609 369 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 C1orf52Q8N6N3 182 aaKnown RBP11.4□□□□□ -0.58
RHO-201ENST00000296271 WDR20Q8TBZ3 569 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 TMEM159Q96B96 161 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 CMTM7Q96FZ5 175 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 IL17FQ96PD4 163 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 TMEM121BQ9BXQ6 578 aaPredicted RBP11.4□□□□□ -0.58
RHO-201ENST00000296271 GORASP2Q9H8Y8 452 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 THG1LQ9NWX6 298 aaKnown RBP11.4□□□□□ -0.58
RHO-201ENST00000296271 SPEGQ15772 3267 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 PABPN1LA6NDY0 278 aaKnown RBP11.4□□□□□ -0.58
RHO-201ENST00000296271 G3V2T6 193 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 SCN2BO60939 215 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 GSTM1P09488 218 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 CYP2A6P11509 494 aaPredicted RBP11.4□□□□□ -0.58
RHO-201ENST00000296271 ZNF30P17039 623 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 AQP1P29972 269 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 RAE1P78406 368 aaKnown RBP11.4□□□□□ -0.58
RHO-201ENST00000296271 GSTM4Q03013 218 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 DAG1Q14118 895 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 ZNF284Q2VY69 593 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 SPATS1Q496A3 300 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 ZCCHC8Q6NZY4 707 aaKnown RBP11.4□□□□□ -0.58
RHO-201ENST00000296271 USP51Q70EK9 711 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 GALNT5Q7Z7M9 940 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 GPR180Q86V85 440 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 CALHM3Q86XJ0 350 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 CLVS1Q8IUQ0 354 aaPredicted RBP11.4□□□□□ -0.58
RHO-201ENST00000296271 GLB1L3Q8NCI6 653 aaPredicted RBP11.4□□□□□ -0.58
RHO-201ENST00000296271 ZNF740Q8NDX6 193 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 MAL2Q969L2 176 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 MBOAT4Q96T53 435 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 C19orf43Q9BQ61 176 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 DCUN1D5Q9BTE7 237 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 KCNH6Q9H252 994 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 ASIC5Q9NY37 505 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 ABCG2Q9UNQ0 655 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 TMEM98Q9Y2Y6 226 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 DGKBQ9Y6T7 804 aa11.4□□□□□ -0.58
RHO-201ENST00000296271 GRXCR2A6NFK2 248 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 CFAP99D6REC4 459 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 hCG_2039718K7EN88 272 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms