RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 PSMB5P28074 263 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 RAB28P51157 221 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 KCNK10P57789 538 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 GSTM4Q03013 218 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 HSPA14Q0VDF9 509 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 GTF3C1Q12789 2109 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 ITIH4Q14624 930 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 ZNF169Q14929 603 aaPredicted RBP8.88□□□□□ -0.99
CNOT9-202ENST00000295701 ZRSR2Q15696 482 aaKnown RBP8.88□□□□□ -0.99
CNOT9-202ENST00000295701 CCSMST1Q4G0I0 132 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 AGAP7PQ5VUJ5 663 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 PACS1Q6VY07 963 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 CHSY3Q70JA7 882 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 ZNF534Q76KX8 674 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 PRUNE1Q86TP1 453 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 FJX1Q86VR8 437 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 OR11G2Q8NGC1 345 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 OR13J1Q8NGT2 312 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 PPP4R1Q8TF05 950 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 TM9SF4Q92544 642 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 C8orf44Q96CB5 159 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 AGAP4Q96P64 663 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 ALS2CR12Q96Q35 445 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 FERMT1Q9BQL6 677 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 TMEM121Q9BTD3 319 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 LACRTQ9GZZ8 138 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 LRRC40Q9H9A6 602 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 PLA2G3Q9NZ20 509 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.88□□□□□ -0.99
CNOT9-202ENST00000295701 PACSIN2Q9UNF0 486 aaPredicted RBP8.88□□□□□ -0.99
CNOT9-202ENST00000295701 REXO2Q9Y3B8 237 aaKnown RBP8.88□□□□□ -0.99
CNOT9-202ENST00000295701 CSMD2Q7Z408 3487 aa8.88□□□□□ -0.99
CNOT9-202ENST00000295701 FBN2P35556 2912 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 LOC105369274A0A096LPK9 316 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 LOC102723532A0A0G2JNH3 316 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 A0A0U1RQJ8 604 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 SOWAHDA6NJG2 315 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 FFAR3O14843 346 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 GPR42O15529 346 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 KLHL41O60662 606 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 GPC4O75487 556 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 WISP2O76076 250 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 TJP3O95049 919 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 F10P00742 488 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 ALBP02768 609 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 CELA2AP08217 269 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 CD9P21926 228 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 GRNP28799 593 aaKnown RBP8.87□□□□□ -0.99
CNOT9-202ENST00000295701 TSFMP43897 325 aaKnown RBP8.87□□□□□ -0.99
CNOT9-202ENST00000295701 ARSFP54793 590 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 NAP1L1P55209 391 aaKnown RBP8.87□□□□□ -0.99
CNOT9-202ENST00000295701 RWDD2BP57060 319 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 VSX2P58304 361 aaPredicted RBP8.87□□□□□ -0.99
CNOT9-202ENST00000295701 PSMA6P60900 246 aaKnown RBP8.87□□□□□ -0.99
CNOT9-202ENST00000295701 SF1Q15637 639 aaKnown RBP8.87□□□□□ -0.99
CNOT9-202ENST00000295701 RBBP7Q16576 425 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 TUBB8Q3ZCM7 444 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 WASHC2DQ5SRD0 308 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 TSTD2Q5T7W7 516 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 FRMPD2BQ6IN97 320 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 SLC22A15Q8IZD6 547 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 OR4N4Q8N0Y3 316 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 OR1N1Q8NGS0 311 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 DLG3Q92796 817 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 FKBP10Q96AY3 582 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 MIPEPQ99797 713 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 LHPPQ9H008 270 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 TSPAN10Q9H1Z9 355 aaPredicted RBP8.87□□□□□ -0.99
CNOT9-202ENST00000295701 RUVBL2Q9Y230 463 aaKnown RBP8.87□□□□□ -0.99
CNOT9-202ENST00000295701 NFS1Q9Y697 457 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 PDZD2O15018 2839 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 CPAMD8Q8IZJ3 1885 aa8.87□□□□□ -0.99
CNOT9-202ENST00000295701 GRID2IPA4D2P6 1211 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 FITM1A5D6W6 292 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 VSTM2BA6NLU5 285 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 PRSS44E7EML9 344 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 PIM1P11309 404 aaPredicted RBP8.86□□□□□ -0.99
CNOT9-202ENST00000295701 EDN3P14138 238 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 ETS1P14921 441 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 AOAHP28039 575 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 BDKRB1P46663 353 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 KLC1Q07866 573 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 FASTKQ14296 549 aaKnown RBP8.86□□□□□ -0.99
CNOT9-202ENST00000295701 SPA17Q15506 151 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 KCTD19Q17RG1 926 aaPredicted RBP8.86□□□□□ -0.99
CNOT9-202ENST00000295701 DNAJC21Q5F1R6 531 aaKnown RBP8.86□□□□□ -0.99
CNOT9-202ENST00000295701 VWA2Q5GFL6 755 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 ISLR2Q6UXK2 745 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 CCDC170Q8IYT3 715 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 SHISA5Q8N114 240 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 LRRC57Q8N9N7 239 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 DNAAF3Q8N9W5 541 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 OR6P1Q8NGX9 317 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 OR2L8Q8NGY9 312 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 OR4L1Q8NH43 312 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 SLC35B2Q8TB61 432 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 STT3BQ8TCJ2 826 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 DENND1AQ8TEH3 1009 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 ATG4AQ8WYN0 398 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 MAGEB10Q96LZ2 347 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms