RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ZNF311Q5JNZ3 666 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 CHRDL2Q6WN34 429 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 OXR1Q8N573 874 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 APOBEC3BQ9UH17 382 aaKnown RBP17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 GPR34Q9UPC5 381 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 MYH1P12882 1939 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 MYH13Q9UKX3 1938 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 HNRNPKP61978 463 aaKnown RBP eCLIP17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 PEG10Q86TG7 708 aaKnown RBP17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 GLIS1Q8NBF1 620 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 DHRS7Q9Y394 339 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 CCR10P46092 362 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 RAB8AP61006 207 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 DPYSQ14117 519 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 C10orf62Q5T681 223 aaPredicted RBP17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 PM20D1Q6GTS8 502 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 KLHDC10Q6PID8 442 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 TMPRSS11AQ6ZMR5 421 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 CAMK1GQ96NX5 476 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 NOL6Q9H6R4 1146 aaKnown RBP17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 PNPLA3Q9NST1 481 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 CYTH4Q9UIA0 394 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 PKD1L3Q7Z443 1732 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 MAFKO60675 156 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 IGFBP5P24593 272 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 CASP9P55211 416 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 ZDHHC14Q8IZN3 488 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 NSMCE3Q96MG7 304 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 DCUN1D5Q9BTE7 237 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 MVB12BQ9H7P6 319 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 CXCR6O00574 342 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 SEMA4FO95754 770 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 EN2P19622 333 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 PTDSS1P48651 473 aaKnown RBP17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 Q9N2J8 555 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 PLCH1Q4KWH8 1693 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 IGLON5A6NGN9 336 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 PTPRCAPQ14761 206 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 TTC9BQ8N6N2 239 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 KBTBD8Q8NFY9 601 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 TSPAN14Q8NG11 270 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 TRIM63Q969Q1 353 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 UTS2RQ9UKP6 389 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 DLX3O60479 287 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 B4GALT2O60909 372 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 NME6O75414 186 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 EIF2B2P49770 351 aaKnown RBP17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 GSTM4Q03013 218 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 GOLGA7Q7Z5G4 137 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 RC3H2Q9HBD1 1191 aaKnown RBP17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 SNPHO15079 494 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 DUX1O43812 170 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 PLGP00747 810 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 XIAPP98170 497 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 APCDD1Q8J025 514 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 ARL10Q8N8L6 244 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 OR4F6Q8NGB9 312 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 NEK7Q8TDX7 302 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 TRIM39Q9HCM9 518 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 STX16-NPEPL1H3BU86 382 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 KPNA4O00629 521 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 STX16O14662 325 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 ARCN1P48444 511 aaKnown RBP17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 TGFBIQ15582 683 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 OR7A2PQ8NGA2 310 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 AGAP11Q8TF27 550 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 MPP4Q96JB8 637 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 SDHAF3Q9NRP4 125 aa17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 CRNNQ9UBG3 495 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP3-201ENST00000295324 BTAF1O14981 1849 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 MANBAO00462 879 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 CD70P32970 193 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 GJA8P48165 433 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 NDUFA5Q16718 116 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 OR52J3Q8NH60 311 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 MRGPRX2Q96LB1 330 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 MKKSQ9NPJ1 570 aaPredicted RBP17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 CCNB2O95067 398 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 STAT5AP42229 794 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 ATCAYQ86WG3 371 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 UXS1Q8NBZ7 420 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 GPATCH1Q9BRR8 931 aaKnown RBP17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 P2RX2Q9UBL9 471 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 NAV1Q8NEY1 1877 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 LDOC1O95751 146 aaPredicted RBP17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 C6P13671 934 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 GDF5P43026 501 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 CDH12P55289 794 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 DMPKQ09013 629 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 ZIC5Q96T25 663 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 CD244Q9BZW8 370 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 KCNH6Q9H252 994 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 LMAN1LQ9HAT1 526 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 FANCFQ9NPI8 374 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 NWD2Q9ULI1 1742 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 SLC16A5O15375 505 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 KLHL18O94889 574 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 CREB5Q02930 508 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms