RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ALKAL1Q6UXT8 129 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 CYP4V2Q6ZWL3 525 aaPredicted RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 FGD2Q7Z6J4 655 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 THAP5Q7Z6K1 395 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 C19orf18Q8NEA5 215 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 HMGB4Q8WW32 186 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 TMIGD2Q96BF3 282 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 RNFT2Q96EX2 444 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 MYEOVQ96EZ4 313 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 HTATIP2Q9BUP3 242 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 PRRG3Q9BZD7 231 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 SUCOQ9UBS9 1254 aaKnown RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 PRSS21Q9Y6M0 314 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 ZNF780BQ9Y6R6 833 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 LCHNA4D1U4 455 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 A8MUA0 341 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 WNT9AO14904 365 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 C6orf47O95873 294 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 GNAO1P09471 354 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 BPIP17213 487 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 RPL4P36578 427 aaKnown RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 LEPRP48357 1165 aaKnown RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 MTA1Q13330 715 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 PYDC2Q56P42 97 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 SPANXN2Q5MJ10 180 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 TRIM40Q6P9F5 258 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 PGBD5Q8N414 524 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 PXYLP1Q8TE99 480 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 FCRL4Q96PJ5 515 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 KLHL28Q9NXS3 571 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 OR10H1Q9Y4A9 318 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 RP1L1Q8IWN7 2480 aaPredicted RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 PRR23D1E9PI22 279 aaPredicted RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 SLC10A3P09131 477 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 PRR23D2P0DMB1 279 aaPredicted RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 CDH1P12830 882 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 CD1EP15812 388 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 ATF6P18850 670 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 CBLP22681 906 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 STT3AP46977 705 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 GCNT6Q5T4J0 391 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 KLHL17Q6TDP4 642 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 ENPP7Q6UWV6 458 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 ZNF730Q6ZMV8 503 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 CHMP1BQ7LBR1 199 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 VTCN1Q7Z7D3 282 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 CLECL1Q8IZS7 167 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 CADM2Q8N3J6 435 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 SVOPQ8N4V2 548 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 OR4E2Q8NGC2 313 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 GATA6Q92908 595 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 RERGQ96A58 199 aaPredicted RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 ROPN1LQ96C74 230 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 RBM4BQ9BQ04 359 aaKnown RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 RBM4Q9BWF3 364 aaKnown RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 SORBS1Q9BX66 1292 aaKnown RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 DERL2Q9GZP9 239 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 TOR3AQ9H497 397 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 SLC32A1Q9H598 525 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 STOX2Q9P2F5 926 aaPredicted RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 VPS29Q9UBQ0 182 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 HMX2A2RU54 273 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 H7BY64 318 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 MANBAO00462 879 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 NDUFS4O43181 175 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 UGT2B17O75795 530 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 POP7O75817 140 aaKnown RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 CYP11A1P05108 521 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 RHOP08100 348 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 CAPN3P20807 821 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 VBP1P61758 197 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 FRG2Q64ET8 278 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 PPP2R2DQ66LE6 453 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 CHSY3Q70JA7 882 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 TRIM69Q86WT6 500 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 KRT73Q86Y46 540 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 CACTIN-AS1Q8N1I8 211 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 DNASE1L2Q92874 299 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 BADQ92934 168 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 C1GALT1C1Q96EU7 318 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 MUS81Q96NY9 551 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 PRAP1Q96NZ9 151 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 FRG2BQ96QU4 278 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 CNPPD1Q9BV87 410 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 HERC2P3Q9BVR0 1158 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 CD244Q9BZW8 370 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 SLC28A3Q9HAS3 691 aa4.66□□□□□ -1.66
UBR1-201ENST00000290650 IFT80Q9P2H3 777 aaPredicted RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 SAMD4AQ9UPU9 718 aaKnown RBP4.66□□□□□ -1.66
UBR1-201ENST00000290650 LY75O60449 1722 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 A0A1W2PP18 115 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 CHURC1-FNTBB4DL54 471 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 MAGEB3O15480 346 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 ARHGEF9O43307 516 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 AP2A2O94973 939 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 VIPP01282 170 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 UGT2B15P54855 530 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 CDC42P60953 191 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 PCDH1Q08174 1060 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 CTC1Q2NKJ3 1217 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms