RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 HPGDP15428 266 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 HTR6P50406 440 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 NUDT6P53370 316 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 OR4D2P58180 307 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 ZNF33AQ06730 810 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 MEP1AQ16819 746 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 CRTC2Q53ET0 693 aaPredicted RBP12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 GOLGA7Q7Z5G4 137 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 LSMEM2Q8N112 164 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 GHDCQ8N2G8 530 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 STON2Q8WXE9 905 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 TRIB2Q92519 343 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 TMEM203Q969S6 136 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 PPP1R14AQ96A00 147 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 TBC1D17Q9HA65 648 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SGK2Q9HBY8 427 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SMOXQ9NWM0 555 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 C1orf109Q9NX04 203 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 AHSPQ9NZD4 102 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 EBF1Q9UH73 591 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SPO11Q9Y5K1 396 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 IRAK3Q9Y616 596 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 NUMA1Q14980 2115 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 K7ERQ8 282 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 RAP2AP10114 183 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 SEMA3AQ14563 771 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 PLA2G4EQ3MJ16 856 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 USP30Q70CQ3 517 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 LILRA2Q8N149 483 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 NLNQ9BYT8 704 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 TIGARQ9NQ88 270 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 KCTD5Q9NXV2 234 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 H7C0S8 307 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 TNFRSF11BO00300 401 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 SLC30A4O14863 429 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 GNAO1P09471 354 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 MTAPQ13126 283 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 PGM2L1Q6PCE3 622 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 ZC3H10Q96K80 434 aaKnown RBP12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 NUSAP1Q9BXS6 441 aaKnown RBP12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 POLR2J2Q9GZM3 115 aaKnown RBP12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 GSTO2Q9H4Y5 243 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 FAIMQ9NVQ4 179 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 HCSTQ9UBK5 93 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 RABL2AQ9UBK7 228 aaPredicted RBP12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 HEMK1Q9Y5R4 338 aaPredicted RBP12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 TRAV19A0A0A6YYK7 116 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 GTF2E2P29084 291 aaKnown RBP12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 COL9A2Q14055 689 aaPredicted RBP12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 TBRG1Q3YBR2 411 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 ZNF404Q494X3 552 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 VANGL1Q8TAA9 524 aaPredicted RBP12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 VMP1Q96GC9 406 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 TTYH2Q9BSA4 534 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 WRAP53Q9BUR4 548 aaKnown RBP12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 SLC22A4Q9H015 551 aa12.24□□□□□ -0.45
SLC6A1-201ENST00000287766 SMIM30A4D0T7 59 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 H3BM21 787 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 C8BP07358 591 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 FAM163BP0C2L3 166 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 PGFP49763 221 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 NFKB2Q00653 900 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 KHDRBS2Q5VWX1 349 aaKnown RBP12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 OR4F3Q6IEY1 312 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 PDE12Q6L8Q7 609 aaKnown RBP12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 RD3Q7Z3Z2 195 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 KRTCAP2Q8N6L1 136 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 AKAP1Q92667 903 aaKnown RBP eCLIP12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 COL26A1Q96A83 441 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 C8orf48Q96LL4 319 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 DERL2Q9GZP9 239 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 ANKRA2Q9H9E1 313 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 ABCB8Q9NUT2 735 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 COL5A3P25940 1745 aaPredicted RBP12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 OPN1SWP03999 348 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 NR2F1P10589 423 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 CD1EP15812 388 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 MYBPC1Q00872 1141 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 PLEKHG6Q3KR16 790 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 HSF5Q4G112 596 aaPredicted RBP12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 TMEM236Q5W0B7 351 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 RAET1GQ6H3X3 334 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 ALKAL1Q6UXT8 129 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 CMTR2Q8IYT2 770 aaKnown RBP12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 SMG9Q9H0W8 520 aaKnown RBP12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 TMEM9Q9P0T7 183 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 SLC22A14Q9Y267 594 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 ACOX3O15254 700 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 PAPSS2O95340 614 aaPredicted RBP12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 BMP7P18075 431 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 RPS3AP61247 264 aaKnown RBP12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 RAB39AQ14964 217 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 CPTPQ5TA50 214 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 ANKRD26P1Q6NSI1 321 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 USP43Q70EL4 1123 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 DNAJB7Q7Z6W7 309 aaPredicted RBP12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 GALNT10Q86SR1 603 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 COMMD2Q86X83 199 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 BPIFB1Q8TDL5 484 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms