RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 ERVK-8P63133 956 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 PRKCDQ05655 676 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 MZT1Q08AG7 82 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 MAD2L1BPQ15013 274 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 SLC36A3Q495N2 470 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 KCTD18Q6PI47 426 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 PRRT2Q7Z6L0 340 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 S100A7AQ86SG5 101 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 OR5B17Q8NGF7 314 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 IL31RAQ8NI17 732 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 ELP5Q8TE02 316 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 ABHD5Q8WTS1 349 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 PMEPA1Q969W9 287 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 NPAS2Q99743 824 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 SUV39H2Q9H5I1 410 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 IGSF9Q9P2J2 1179 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 KLF15Q9UIH9 416 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 MKLN1Q9UL63 735 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 TLL2Q9Y6L7 1015 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 SH3PXD2BA1X283 911 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GJE1A6NN92 205 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 B4DGG1 531 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 DLDP09622 509 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ACP5P13686 325 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 HOXB2P14652 356 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GSTT1P30711 240 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 WASP42768 502 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CAV3P56539 151 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 RPS14P62263 151 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 TLE2Q04725 743 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 DSC3Q14574 896 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 MELKQ14680 651 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ZFP69Q49AA0 526 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PTPN20Q4JDL3 420 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PLEKHG4Q58EX7 1191 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 MBLAC2Q68D91 279 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 BORAQ6PGQ7 559 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GPR65Q8IYL9 337 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PLD5Q8N7P1 536 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CEP76Q8TAP6 659 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 DAZLQ92904 295 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PEX13Q92968 403 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SLC25A36Q96CQ1 311 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 C12orf42Q96LP6 360 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 OR2M4Q96R27 311 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 MTERF1Q99551 399 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 DUSP9Q99956 384 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SDCBP2Q9H190 292 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 KAT8Q9H7Z6 458 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GPRC5BQ9NZH0 403 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 FAM237AA0A1B0GTK4 181 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ATP6AP2A0A1C7CYW4 349 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 A0A1W2PRQ8 180 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 OR2AT4A6NND4 320 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 NT5C1B-RDH14C9J2C7 533 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CLDN25C9JDP6 229 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 RTCAO00442 366 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 TFECO14948 347 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CYB5BO43169 146 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PAPSS1O43252 624 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 EDF1O60869 148 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 TRMUO75648 421 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ATP6AP2O75787 350 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 TRAPPC6AO75865 159 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 IL33O95760 270 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ALDOAP04075 364 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CFL1P23528 166 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GDI1P31150 447 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 HERVK_113P63132 956 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 MALLQ13021 153 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GAS6Q14393 721 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ELAVL3Q14576 367 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 RFWD3Q6PCD5 774 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 LRRN1Q6UXK5 716 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 TMPPEQ6ZT21 453 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GRPEL2Q8TAA5 225 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SETD6Q8TBK2 473 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SLC22A8Q8TCC7 542 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 NCSTNQ92542 709 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ZBTB10Q96DT7 871 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PHB2Q99623 299 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ERVK-6Q9BXR3 956 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 LRRC4CQ9HCJ2 640 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ZDHHC3Q9NYG2 299 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 WASF2Q9Y6W5 498 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SPATA31D1Q6ZQQ2 1576 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CACNA1CQ13936 2221 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CDC7O00311 574 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 BPNT1O95861 308 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 MAGEA12P43365 314 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 DSC2Q02487 901 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SCRN3Q0VDG4 424 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PUM1Q14671 1186 aaKnown RBP eCLIP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GLYATQ6IB77 296 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 UNC5DQ6UXZ4 953 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PLEKHG7Q6ZR37 379 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 C6orf120Q7Z4R8 191 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 IL22RA1Q8N6P7 574 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms