RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 HOXB9P17482 250 aaPredicted RBP26.73■■□□□ 1.87
CBX4-201ENST00000269397 SDC1P18827 310 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 EPORP19235 508 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 FPR1P21462 350 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 HMGCLP35914 325 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 ATP5C1P36542 298 aaKnown RBP26.73■■□□□ 1.87
CBX4-201ENST00000269397 IRF5Q13568 498 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 PLEKHG6Q3KR16 790 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 TSPYL5Q86VY4 417 aaPredicted RBP26.73■■□□□ 1.87
CBX4-201ENST00000269397 APOLD1Q96LR9 279 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 CLDN11O75508 207 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 KCNK2O95069 426 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 ZNF404Q494X3 552 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 PDE12Q6L8Q7 609 aaKnown RBP26.72■■□□□ 1.87
CBX4-201ENST00000269397 ENTHD1Q8IYW4 607 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 DNMT3LQ9UJW3 386 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 CAB39Q9Y376 341 aaPredicted RBP26.72■■□□□ 1.87
CBX4-201ENST00000269397 ILVBLA1L0T0 632 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 WDR47O94967 919 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 GADD45AP24522 165 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 GKP32189 559 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 DEPDC1Q5TB30 811 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 WBP2Q969T9 261 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 FAM193BQ96PV7 902 aaPredicted RBP26.72■■□□□ 1.87
CBX4-201ENST00000269397 THUMPD1Q9NXG2 353 aaKnown RBP26.72■■□□□ 1.87
CBX4-201ENST00000269397 HCSTQ9UBK5 93 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 HSPE1-MOB4S4R3N1 261 aa26.72■■□□□ 1.87
CBX4-201ENST00000269397 PSMD11O00231 422 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 KRT6AP02538 564 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 KRT6BP04259 564 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 ENGP17813 658 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 MZF1P28698 734 aaPredicted RBP26.71■■□□□ 1.87
CBX4-201ENST00000269397 KRT6CP48668 564 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 NPRL3Q12980 569 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 ZNF621Q6ZSS3 439 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 BEND7Q8N7W2 519 aaPredicted RBP26.71■■□□□ 1.87
CBX4-201ENST00000269397 CDC26Q8NHZ8 85 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 KCNC2Q96PR1 638 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 ITPAQ9BY32 194 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 ASIC5Q9NY37 505 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 ERVK-11Q9UQG0 969 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 EVPLLA8MZ36 301 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 K7ERQ8 282 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 CLIC1O00299 241 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 COL6A1P12109 1028 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 NR4A2P43354 598 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 ZXDBP98169 803 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 SMU1Q2TAY7 513 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 RBFAQ8N0V3 343 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 PANX1Q96RD7 426 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 COPS4Q9BT78 406 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 ELOVL6Q9H5J4 265 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 CCNB1IP1Q9NPC3 277 aa26.71■■□□□ 1.87
CBX4-201ENST00000269397 LOC100506127A0A0U1RQW1 187 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 CORO1AP31146 461 aaKnown RBP26.7■■□□□ 1.86
CBX4-201ENST00000269397 RHOAP61586 193 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 NFATC2Q13469 925 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 C6orf183Q5T699 404 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 SYTL1Q8IYJ3 562 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 SLC38A4Q969I6 547 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 EHD1Q9H4M9 534 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 IL26Q9NPH9 171 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 ERVW-1Q9UQF0 538 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 SNPHO15079 494 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 KCNK5O95279 499 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 AQP1P29972 269 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 CAMK2GQ13555 558 aaPredicted RBP26.7■■□□□ 1.86
CBX4-201ENST00000269397 PROX2Q3B8N5 592 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 CERS6Q6ZMG9 384 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 AKAP14Q86UN6 197 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 GALNT13Q8IUC8 556 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 CLIP4Q8N3C7 705 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 PSD4Q8NDX1 1056 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 TRIB2Q92519 343 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 ELMO1Q92556 727 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 REEP1Q9H902 201 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 ARL15Q9NXU5 204 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 LHX3Q9UBR4 397 aa26.7■■□□□ 1.86
CBX4-201ENST00000269397 MICAL3Q7RTP6 2002 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 CLDN24A6NM45 220 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 M0R082 166 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 ZDHHC11BP0C7U3 371 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 ATF6P18850 670 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 KDELR2P33947 212 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 GRK5P34947 590 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 PPP3CCP48454 512 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 NUDT6P53370 316 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 VMACQ2NL98 169 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 ZXDCQ2QGD7 858 aaPredicted RBP26.69■■□□□ 1.86
CBX4-201ENST00000269397 GPRC6AQ5T6X5 926 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 CXorf57Q6NSI4 855 aaKnown RBP26.69■■□□□ 1.86
CBX4-201ENST00000269397 CEP295NLQ96MC4 621 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 REXO4Q9GZR2 422 aaKnown RBP26.69■■□□□ 1.86
CBX4-201ENST00000269397 FPGTO14772 594 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 CLDN7O95471 211 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 CPSF4O95639 269 aaKnown RBP26.69■■□□□ 1.86
CBX4-201ENST00000269397 P3H2Q8IVL5 708 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 ZZZ3Q8IYH5 903 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 RNF6Q9Y252 685 aa26.69■■□□□ 1.86
CBX4-201ENST00000269397 HTTP42858 3142 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms