RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 PRAP1Q96NZ9 151 aa13.36□□□□□ -0.27
NPC1-201ENST00000269228 NDC1Q9BTX1 674 aa13.36□□□□□ -0.27
NPC1-201ENST00000269228 KLF16Q9BXK1 252 aaPredicted RBP13.36□□□□□ -0.27
NPC1-201ENST00000269228 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.36□□□□□ -0.27
NPC1-201ENST00000269228 CRISPLD1Q9H336 500 aa13.36□□□□□ -0.27
NPC1-201ENST00000269228 CTPS2Q9NRF8 586 aa13.36□□□□□ -0.27
NPC1-201ENST00000269228 PNPLA3Q9NST1 481 aa13.36□□□□□ -0.27
NPC1-201ENST00000269228 HRASLS2Q9NWW9 162 aa13.36□□□□□ -0.27
NPC1-201ENST00000269228 PTGFRNQ9P2B2 879 aa13.36□□□□□ -0.27
NPC1-201ENST00000269228 HIDE1A8MVS5 230 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 PSMD4P55036 377 aaKnown RBP13.35□□□□□ -0.27
NPC1-201ENST00000269228 FAM26DQ5JW98 314 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 ZNF678Q5SXM1 525 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 KLHDC10Q6PID8 442 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 FGF13Q92913 245 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 RANBP9Q96S59 729 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 CSNK1G1Q9HCP0 422 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 GIMAP2Q9UG22 337 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 STX16-NPEPL1H3BU86 382 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 STX16O14662 325 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 GPIP06744 558 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 GJA8P48165 433 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 ZCCHC7Q8N3Z6 543 aaKnown RBP13.35□□□□□ -0.27
NPC1-201ENST00000269228 ARL10Q8N8L6 244 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 ZNF354BQ96LW1 612 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 SLC22A2O15244 555 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 ALDOAP04075 364 aaKnown RBP13.35□□□□□ -0.27
NPC1-201ENST00000269228 JUNP05412 331 aaKnown RBP13.35□□□□□ -0.27
NPC1-201ENST00000269228 ATF6P18850 670 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 SLC6A4P31645 630 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 KAT2AQ92830 837 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 RNF38Q9H0F5 515 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 GDE1Q9NZC3 331 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 FADS2P1A8MWK0 482 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 FANCGO15287 622 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 ITGA1P56199 1179 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 ELOCQ15369 112 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 DGUOKQ16854 277 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 IFI44LQ53G44 452 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 RANBP3LQ86VV4 465 aaPredicted RBP13.35□□□□□ -0.27
NPC1-201ENST00000269228 ARFGAP1Q8N6T3 406 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 TRPV3Q8NET8 790 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 PIGKQ92643 395 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 SLC35A5Q9BS91 424 aa13.35□□□□□ -0.27
NPC1-201ENST00000269228 A0A1B0GUL6 1792 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 C9J4A7 227 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 KLF11O14901 512 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 REM1O75628 298 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 MED26O95402 600 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 BPIP17213 487 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 PFKLP17858 780 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 AGXTP21549 392 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 C5AR1P21730 350 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 CRISP3P54108 245 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 SNAPC1Q16533 368 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 PARP8Q8N3A8 854 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 MAPK15Q8TD08 544 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 LRTOMTQ8WZ04 291 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 FAM3CQ92520 227 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 NUAK2Q9H093 628 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 UTS2RQ9UKP6 389 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 POMPQ9Y244 141 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 AK5Q9Y6K8 562 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 USP54Q70EL1 1684 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 H0YGN5 161 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 CLIC1O00299 241 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 LAMTOR5O43504 91 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 SMAD6O43541 496 aaKnown RBP13.34□□□□□ -0.27
NPC1-201ENST00000269228 B4GALT2O60909 372 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 MFN2O95140 757 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 POU2F1P14859 743 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 CD68P34810 354 aaPredicted RBP13.34□□□□□ -0.27
NPC1-201ENST00000269228 UFM1P61960 85 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 PCBP2Q15366 365 aaKnown RBP eCLIP13.34□□□□□ -0.27
NPC1-201ENST00000269228 FRMD7Q6ZUT3 714 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 ZDHHC21Q8IVQ6 265 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 OR9I1Q8NGQ6 314 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 MPP4Q96JB8 637 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 LRRC3Q9BY71 257 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 PCDHAC1Q9H158 963 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 MOCS1Q9NZB8 636 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 NFS1Q9Y697 457 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 ADAMDEC1O15204 470 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 G6PDP11413 515 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 CSTF2P33240 577 aaKnown RBP eCLIP13.34□□□□□ -0.27
NPC1-201ENST00000269228 SPINT3P49223 89 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 TAS2R50P59544 299 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 PDZK1Q5T2W1 519 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.34□□□□□ -0.27
NPC1-201ENST00000269228 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.34□□□□□ -0.27
NPC1-201ENST00000269228 CBR4Q8N4T8 237 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 DNAJB8Q8NHS0 232 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 JPH3Q8WXH2 748 aaPredicted RBP13.34□□□□□ -0.27
NPC1-201ENST00000269228 RBM4BQ9BQ04 359 aaKnown RBP13.34□□□□□ -0.27
NPC1-201ENST00000269228 SYT11Q9BT88 431 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 RBM4Q9BWF3 364 aaKnown RBP13.34□□□□□ -0.27
NPC1-201ENST00000269228 ADRB3P13945 408 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 CD1DP15813 335 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 SHMT2P34897 504 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms