RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ZFP42Q96MM3 310 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 SRRQ9GZT4 340 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 SAV1Q9H4B6 383 aaPredicted RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 RNF121Q9H920 327 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 FAM105AQ9NUU6 356 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 PRMT7Q9NVM4 692 aaPredicted RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 SIRT5Q9NXA8 310 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 SMPD4Q9NXE4 827 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 KLHL8Q9P2G9 620 aaPredicted RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 C3orf18Q9UK00 162 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 ELF5Q9UKW6 265 aaPredicted RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 SLC6A14Q9UN76 642 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 U3KQ87 197 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 TEX46H3BTG2 121 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 WWP2O00308 870 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 DFNA5O60443 496 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 AP2A1O95782 977 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 HOXC6P09630 235 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 CSF3P09919 207 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 TRAPPC2P0DI81 140 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 TRAPPC2BP0DI82 140 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 GGT1P19440 569 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 IGFBP5P24593 272 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 THPOP40225 353 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 CPT1AP50416 773 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 RABGGTBP53611 331 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 ATN1P54259 1190 aaPredicted RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 TMEM132DQ14C87 1099 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 SOWAHAQ2M3V2 549 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 CCNJQ5T5M9 372 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 PIK3R6Q5UE93 754 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 MFSD14CQ5VZR4 134 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 KCTD11Q693B1 232 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 CCDC149Q6ZUS6 474 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 OR11H4Q8NGC9 324 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 OR6B3Q8NGW1 331 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 OR2T11Q8NH01 316 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 CEP19Q96LK0 163 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 FRMD6Q96NE9 622 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 DCLRE1CQ96SD1 692 aaKnown RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 HBEGFQ99075 208 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 RNF39Q9H2S5 420 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 IFT22Q9H7X7 185 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 HEXA-AS1Q9H8Q6 139 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 IL1RAPQ9NPH3 570 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 CCDC59Q9P031 241 aaKnown RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 TSPAN16Q9UKR8 245 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 RNF112Q9ULX5 631 aa8.55□□□□□ -1.04
VAPB-201ENST00000265619 TIMM13Q9Y5L4 95 aaPredicted RBP8.55□□□□□ -1.04
VAPB-201ENST00000265619 NUP214P35658 2090 aaPredicted RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 ZNF98A6NK75 572 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 MEIS3P2A8K0S8 358 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 M0QZ92 97 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 ARVCFO00192 962 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 CCL22O00626 93 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 MATN4O95460 622 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 CFDP00746 253 aaPredicted RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 HOXB3P14651 431 aaPredicted RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 RPS19P39019 145 aaKnown RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 NRG1Q02297 640 aaPredicted RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 CDH18Q13634 790 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 HKDC1Q2TB90 917 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 DEFB115Q30KQ5 88 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 RUNDC3AQ59EK9 446 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 NOMO2Q5JPE7 1267 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 TIGD7Q6NT04 549 aaPredicted RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 LRFN4Q6PJG9 635 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 ZNF600Q6ZNG1 722 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 GALNT10Q86SR1 603 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 PROSER1Q86XN7 944 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 PSTKQ8IV42 348 aaKnown RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 DENND1CQ8IV53 801 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 FNDC5Q8NAU1 212 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 OR6C4Q8NGE1 309 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 GPR150Q8NGU9 434 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 SPATA22Q8NHS9 363 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 RDH12Q96NR8 316 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 WACQ9BTA9 647 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 CCDC32Q9BV29 185 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 TTLL2Q9BWV7 592 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 LRRC3Q9BY71 257 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 KCMF1Q9P0J7 381 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 RIMKLBQ9ULI2 386 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 PCDHGA9Q9Y5G4 932 aaKnown RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 GMPPBQ9Y5P6 360 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 MYO7AQ13402 2215 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 C17orf102A2RUQ5 167 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 WASHC1A8K0Z3 465 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 FAM72CH0Y354 149 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 GTPBP1O00178 669 aaKnown RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 EEDO75530 441 aaKnown RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 RPLP0P05388 317 aaKnown RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 PAMP19021 973 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 NFKB1P19838 968 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 HAAOP46952 286 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 CLCNKAP51800 687 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 VEPH1Q14D04 833 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 TUSC1Q2TAM9 212 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 FAM209BQ5JX69 171 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms