RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SLC26A3P40879 764 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 MAPK10P53779 464 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 DEFB110Q30KQ9 67 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 TECRLQ5HYJ1 363 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 CACTIN-AS1Q8N1I8 211 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 FBXO39Q8N4B4 442 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 AGBL5Q8NDL9 886 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 OR2L3Q8NG85 312 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 FBXL8Q96CD0 374 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 SCYL1Q96KG9 808 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 TRAPPC9Q96Q05 1148 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 CMKLR1Q99788 373 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 PPCSQ9HAB8 311 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 SLC6A20Q9NP91 592 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 C1GALT1Q9NS00 363 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 CD274Q9NZQ7 290 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 XPR1Q9UBH6 696 aa17.67■□□□□ 0.42
SDF4-201ENST00000263741 TRABD2BA6NFA1 517 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 PLD2O14939 933 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 HGSO14964 777 aaPredicted RBP17.66■□□□□ 0.42
SDF4-201ENST00000263741 KERAO60938 352 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 FGF3P11487 239 aaPredicted RBP17.66■□□□□ 0.42
SDF4-201ENST00000263741 GDF5P43026 501 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 CCDC91Q7Z6B0 441 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 C4orf33Q8N1A6 199 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 WDR36Q8NI36 951 aaKnown RBP17.66■□□□□ 0.42
SDF4-201ENST00000263741 KLHL6Q8WZ60 621 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 CTRCQ99895 268 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 TMEM79Q9BSE2 394 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 APMAPQ9HDC9 416 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 FAM60AQ9NP50 221 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 ANGPTL2Q9UKU9 493 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 ASB1Q9Y576 335 aa17.66■□□□□ 0.42
SDF4-201ENST00000263741 HCRTR1O43613 425 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 ANXA5P08758 320 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 JMJD7P0C870 316 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 FOLR1P15328 257 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 ARL4DP49703 201 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 SLC5A12Q1EHB4 618 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 PRAMEF13Q5VWM6 474 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 C16orf46Q6P387 395 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 C19orf47Q8N9M1 422 aaKnown RBP17.65■□□□□ 0.42
SDF4-201ENST00000263741 STAG3L4Q8TBR4 150 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 RHBDF1Q96CC6 855 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 PRR11Q96HE9 360 aaPredicted RBP17.65■□□□□ 0.42
SDF4-201ENST00000263741 INTS7Q9NVH2 962 aaKnown RBP17.65■□□□□ 0.42
SDF4-201ENST00000263741 CUEDC1Q9NWM3 386 aaPredicted RBP17.65■□□□□ 0.42
SDF4-201ENST00000263741 SIDT1Q9NXL6 827 aaKnown RBP17.65■□□□□ 0.42
SDF4-201ENST00000263741 CPSF2Q9P2I0 782 aaKnown RBP17.65■□□□□ 0.42
SDF4-201ENST00000263741 MSRB2Q9Y3D2 182 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 TMX2-CTNND1H3BSU7 103 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 TAPBPO15533 448 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 ZBTB11O95625 1053 aaPredicted RBP17.65■□□□□ 0.42
SDF4-201ENST00000263741 NELFEP18615 380 aaKnown RBP17.65■□□□□ 0.42
SDF4-201ENST00000263741 HSD17B2P37059 387 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 GRIA3P42263 894 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 FOXM1Q08050 763 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 ACAP2Q15057 778 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 RASA2Q15283 850 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 GPR19Q15760 415 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 PTCHD3Q3KNS1 767 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 ICE2Q659A1 982 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 KLC3Q6P597 504 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 BMPERQ8N8U9 685 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 SLC22A18Q96BI1 424 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 SLC41A2Q96JW4 573 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 OR4K3Q96R72 315 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 C12orf65Q9H3J6 166 aaKnown RBP17.65■□□□□ 0.42
SDF4-201ENST00000263741 WWOXQ9NZC7 414 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 TMEM216Q9P0N5 145 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 SEMA5BQ9P283 1151 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 LGALS13Q9UHV8 139 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 PCDHB11Q9Y5F2 797 aa17.65■□□□□ 0.42
SDF4-201ENST00000263741 FER1L5A0AVI2 2057 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 APC2O95996 2303 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 AHCTF1Q8WYP5 2266 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 IGKV1-8A0A0C4DH67 115 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 GMNCA6NCL1 334 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 ZNF839A8K0R7 811 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 TOX3O15405 576 aaPredicted RBP17.64■□□□□ 0.41
SDF4-201ENST00000263741 TNFSF15O95150 251 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 MTHFD2P13995 350 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 MLLT3P42568 568 aaPredicted RBP17.64■□□□□ 0.41
SDF4-201ENST00000263741 HSPA7P48741 367 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 AGTR2P50052 363 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 CDHR3Q6ZTQ4 885 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 OR56A3Q8NH54 315 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 TSNARE1Q96NA8 513 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 OR6C1Q96RD1 312 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 STMN4Q9H169 189 aaPredicted RBP17.64■□□□□ 0.41
SDF4-201ENST00000263741 AKAP7Q9P0M2 348 aaPredicted RBP17.64■□□□□ 0.41
SDF4-201ENST00000263741 AK5Q9Y6K8 562 aa17.64■□□□□ 0.41
SDF4-201ENST00000263741 H0YHG0 523 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 HSD11B2P80365 405 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 CDKL1Q00532 357 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 FCRL6Q6DN72 434 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 SH2D5Q6ZV89 423 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 SRRM1Q8IYB3 904 aaKnown RBP17.63■□□□□ 0.41
SDF4-201ENST00000263741 RIBC1Q8N443 379 aaPredicted RBP17.63■□□□□ 0.41
SDF4-201ENST00000263741 PDPRQ8NCN5 879 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms