RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 KIF19Q2TAC6 998 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 GLIPR1L2Q4G1C9 344 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 LMNTD1Q8N9Z9 388 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 RP9Q8TA86 221 aaKnown RBP23.05■■□□□ 1.28
EPCAM-201ENST00000263735 C1orf216Q8TAB5 229 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 WDR20Q8TBZ3 569 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 DNASE2BQ8WZ79 361 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 CXorf40BQ96DE9 158 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 SH2B3Q9UQQ2 575 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 PSMD12O00232 456 aaPredicted RBP23.05■■□□□ 1.28
EPCAM-201ENST00000263735 C1GALT1C1LP0DN25 315 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 LAPTM5Q13571 262 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 SGO1Q5FBB7 561 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 PAGE2BQ5JRK9 111 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 C10orf62Q5T681 223 aaPredicted RBP23.05■■□□□ 1.28
EPCAM-201ENST00000263735 TMEFF1Q8IYR6 380 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 POU5F2Q8N7G0 328 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 LINC01555Q8NAE3 123 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 FNDC5Q8NAU1 212 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 MIR1-1HGQ9H1L0 117 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 AIG1Q9NVV5 245 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 TAAR2Q9P1P5 351 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 ZNF624Q9P2J8 865 aaPredicted RBP23.05■■□□□ 1.28
EPCAM-201ENST00000263735 APOBEC3BQ9UH17 382 aaKnown RBP23.05■■□□□ 1.28
EPCAM-201ENST00000263735 ICKQ9UPZ9 632 aa23.05■■□□□ 1.28
EPCAM-201ENST00000263735 MDC1Q14676 2089 aaKnown RBP23.04■■□□□ 1.28
EPCAM-201ENST00000263735 A0A1W2PPV9 198 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 CFAP73A6NFT4 308 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 NPIPB8E9PQR5 432 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 TLR4O00206 839 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 EZRP15311 586 aaKnown RBP23.04■■□□□ 1.28
EPCAM-201ENST00000263735 PRPH2P23942 346 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 CPA2P48052 419 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 ACADVLP49748 655 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 EMX2Q04743 252 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 CSTF3Q12996 717 aaKnown RBP23.04■■□□□ 1.28
EPCAM-201ENST00000263735 GRIK2Q13002 908 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 MAD2L1Q13257 205 aaPredicted RBP23.04■■□□□ 1.28
EPCAM-201ENST00000263735 MAPRE2Q15555 327 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 AP5B1Q2VPB7 878 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 ZNF542PQ5EBM4 170 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 CATSPEREQ5SY80 951 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 NXPE4Q6UWF7 544 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 C17orf64Q86WR6 236 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 C2orf73Q8N5S3 287 aaPredicted RBP23.04■■□□□ 1.28
EPCAM-201ENST00000263735 SH3KBP1Q96B97 665 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 REPS1Q96D71 796 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 MTFMTQ96DP5 389 aaKnown RBP23.04■■□□□ 1.28
EPCAM-201ENST00000263735 BTBD10Q9BSF8 475 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 ACPTQ9BZG2 426 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 BRINP2Q9C0B6 783 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 C1orf21Q9H246 121 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 SDR39U1Q9NRG7 319 aaPredicted RBP23.04■■□□□ 1.28
EPCAM-201ENST00000263735 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.04■■□□□ 1.284e-7■□□□□ 10.2
EPCAM-201ENST00000263735 TAC3Q9UHF0 121 aa23.04■■□□□ 1.28
EPCAM-201ENST00000263735 RSL1D1O76021 490 aaKnown RBP23.03■■□□□ 1.28
EPCAM-201ENST00000263735 JUNDP17535 347 aa23.03■■□□□ 1.28
EPCAM-201ENST00000263735 VARSP26640 1264 aaKnown RBP23.03■■□□□ 1.28
EPCAM-201ENST00000263735 WDR45BQ5MNZ6 344 aa23.03■■□□□ 1.28
EPCAM-201ENST00000263735 MED27Q6P2C8 311 aa23.03■■□□□ 1.28
EPCAM-201ENST00000263735 TSSK4Q6SA08 328 aa23.03■■□□□ 1.28
EPCAM-201ENST00000263735 WDR5BQ86VZ2 330 aa23.03■■□□□ 1.28
EPCAM-201ENST00000263735 MIER2Q8N344 545 aa23.03■■□□□ 1.28
EPCAM-201ENST00000263735 NCOR1O75376 2440 aa23.03■■□□□ 1.28
EPCAM-201ENST00000263735 KNL1Q8NG31 2342 aa23.03■■□□□ 1.28
EPCAM-201ENST00000263735 OR5K4A6NMS3 321 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 B2RBV5 119 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 CSF2P04141 144 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 TDGF1P13385 188 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 HSD3B1P14060 373 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 SLC2A4P14672 509 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 NME1P15531 152 aaKnown RBP23.02■■□□□ 1.28
EPCAM-201ENST00000263735 GPX3P22352 226 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 HSD3B2P26439 372 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 SHMT2P34897 504 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 SLC19A1P41440 591 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 HMGCS1Q01581 520 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 CYLC2Q14093 348 aaPredicted RBP23.02■■□□□ 1.28
EPCAM-201ENST00000263735 HIST2H2ACQ16777 129 aaPredicted RBP23.02■■□□□ 1.28
EPCAM-201ENST00000263735 HIST2H2AA3Q6FI13 130 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 IYDQ6PHW0 289 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 LAYNQ6UX15 382 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 RINLQ6ZS11 566 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 SNX32Q86XE0 403 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 ZFPM2Q8WW38 1151 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 NRTNQ99748 197 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 PELI2Q9HAT8 420 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 BRF2Q9HAW0 419 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 NOP53Q9NZM5 478 aaKnown RBP23.02■■□□□ 1.28
EPCAM-201ENST00000263735 GPR45Q9Y5Y3 372 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 LOC100653049A0A140TA62 436 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 LAMTOR5O43504 91 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 KRT34O76011 436 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 FNTBP49356 437 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 NEK2P51955 445 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 DIO3P55073 304 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 SLBPQ14493 270 aaKnown RBP eCLIP23.02■■□□□ 1.28
EPCAM-201ENST00000263735 RPS6KA2Q15349 733 aa23.02■■□□□ 1.28
EPCAM-201ENST00000263735 TAF8Q7Z7C8 310 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms