RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 KCTD5Q9NXV2 234 aa15.82■□□□□ 0.12
SREBF1-201ENST00000261646 SEC14L3Q9UDX4 400 aa15.82■□□□□ 0.12
SREBF1-201ENST00000261646 CSTF2P33240 577 aaKnown RBP eCLIP15.81■□□□□ 0.12
SREBF1-201ENST00000261646 HKDC1Q2TB90 917 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 CLEC14AQ86T13 490 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 ZFAND4Q86XD8 727 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 PHC2Q8IXK0 858 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 TBC1D19Q8N5T2 526 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 OR6Q1Q8NGQ2 317 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 PTERQ96BW5 349 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 TTYH1Q9H313 450 aaPredicted RBP15.81■□□□□ 0.12
SREBF1-201ENST00000261646 TMEM138Q9NPI0 162 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 KRCC1Q9NPI7 259 aaPredicted RBP15.81■□□□□ 0.12
SREBF1-201ENST00000261646 SEMA3GQ9NS98 782 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 FZD4Q9ULV1 537 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 COL1A2P08123 1366 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 SMIM35A0A1B0GVV1 85 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 A6NL46 340 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 ARHGEF33A8MVX0 844 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 ZNF195O14628 629 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 STX16O14662 325 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 GGT1P19440 569 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 TACR2P21452 398 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 RPS3P23396 243 aaKnown RBP eCLIP15.81■□□□□ 0.125e-7■■□□□ 13.4
SREBF1-201ENST00000261646 ACVRL1P37023 503 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 ZNF33AQ06730 810 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 TAF1AQ15573 450 aaPredicted RBP15.81■□□□□ 0.12
SREBF1-201ENST00000261646 XAGE5Q8WWM1 108 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 MGLLQ99685 303 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 ACBD6Q9BR61 282 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 ATP13A3Q9H7F0 1226 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 MRM3Q9HC36 420 aaKnown RBP15.81■□□□□ 0.12
SREBF1-201ENST00000261646 CORINQ9Y5Q5 1042 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 OAS3Q9Y6K5 1087 aaKnown RBP15.81■□□□□ 0.12
SREBF1-201ENST00000261646 ANKRD36CQ5JPF3 1778 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 SLC28A2O43868 658 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 UGT2B17O75795 530 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 OR2B3O76000 313 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 PAPSS2O95340 614 aaPredicted RBP15.81■□□□□ 0.12
SREBF1-201ENST00000261646 PRLP01236 227 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 DNTTP04053 509 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 RCVRNP35243 200 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 SNRPD2P62316 118 aaKnown RBP15.81■□□□□ 0.12
SREBF1-201ENST00000261646 C2orf80Q0P641 193 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 NPRL3Q12980 569 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 TIGD5Q53EQ6 642 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 ALFQ53S48 1182 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 C10orf62Q5T681 223 aaPredicted RBP15.81■□□□□ 0.12
SREBF1-201ENST00000261646 CDK20Q8IZL9 346 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 SLC37A3Q8NCC5 494 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 RHOXF1Q8NHV9 184 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 RHEBL1Q8TAI7 183 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 TSGA13Q96PP4 275 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 ACAT2Q9BWD1 397 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 POLR2J3Q9H1A7 115 aaKnown RBP15.81■□□□□ 0.12
SREBF1-201ENST00000261646 BRD9Q9H8M2 597 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 CTPS2Q9NRF8 586 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 GTF2A1LQ9UNN4 478 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 HS3ST4Q9Y661 456 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 CNTRLQ7Z7A1 2325 aa15.81■□□□□ 0.12
SREBF1-201ENST00000261646 GLYATL1P3A0A0U1RQE8 302 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 FAM92AA1XBS5 289 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 BMP4P12644 408 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 PRG2P13727 222 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 WEE1P30291 646 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 ASMTP46597 345 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 GTDC1Q4AE62 458 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 MACC1Q6ZN28 852 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 MEIOBQ8N635 442 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 KCTD7Q96MP8 289 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 ZBTB20Q9HC78 741 aaPredicted RBP15.8■□□□□ 0.12
SREBF1-201ENST00000261646 IL37Q9NZH6 218 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 STAT5AP42229 794 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 HTR6P50406 440 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 TPGS1Q6ZTW0 290 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 DCP2Q8IU60 420 aaKnown RBP15.8■□□□□ 0.12
SREBF1-201ENST00000261646 MS4A12Q9NXJ0 267 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 EIF3KQ9UBQ5 218 aaKnown RBP15.8■□□□□ 0.12
SREBF1-201ENST00000261646 POFUT2Q9Y2G5 429 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 MYO10Q9HD67 2058 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 IL7P13232 177 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 PRPS1L1P21108 318 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 GABRB3P28472 473 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 MANFP55145 182 aaKnown RBP15.8■□□□□ 0.12
SREBF1-201ENST00000261646 FBXL22Q6P050 247 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 C14orf80Q86SX3 495 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 LILRB4Q8NHJ6 448 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 ZFP3Q96NJ6 502 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 EVLQ9UI08 416 aaPredicted RBP15.8■□□□□ 0.12
SREBF1-201ENST00000261646 BAIAP2Q9UQB8 552 aa15.8■□□□□ 0.12
SREBF1-201ENST00000261646 H7C4K7 107 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 CKMT1AP12532 417 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 HECTD3Q5T447 861 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 PIK3R6Q5UE93 754 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 TIGD4Q8IY51 512 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 C7orf57Q8NEG2 295 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 KLHL6Q8WZ60 621 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 ZNF382Q96SR6 550 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 WACQ9BTA9 647 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 TPT1P8Q9HAU6 139 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms