RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 Q9N2J8 555 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ZDHHC18Q9NUE0 388 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 NKIRAS2Q9NYR9 191 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF701M0R085 212 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ENTPD6O75354 484 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 HLA-DQA2P01906 255 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 RBM34P42696 430 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 MYBPC1Q00872 1141 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 MELKQ14680 651 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 PLEKHN1Q494U1 663 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 PIK3R6Q5UE93 754 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ANO7Q6IWH7 933 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 DUS1LQ6P1R4 473 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 SPESP1Q6UW49 350 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 COMMD2Q86X83 199 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CLVS1Q8IUQ0 354 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 DAW1Q8N136 415 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 FTMTQ8N4E7 242 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM156Q8N614 296 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ZFPM2Q8WW38 1151 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 EXOC2Q96KP1 924 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 KLHL32Q96NJ5 620 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 PCDH12Q9NPG4 1184 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 SH3GLB1Q9Y371 365 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 LRRC42Q9Y546 428 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CXCR6O00574 342 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ADAMTS3O15072 1205 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 PEX11AO75192 247 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CDH3P22223 829 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 S100A7P31151 101 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CTSKP43235 329 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF763Q0D2J5 394 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 TAF5Q15542 800 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 RTL6Q6ICC9 239 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM220Q6QAJ8 160 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 EPGNQ6UW88 154 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 DGAT2Q96PD7 388 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 HIST1H2AAQ96QV6 131 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 BHLHE41Q9C0J9 482 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 NOL6Q9H6R4 1146 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 SIRPGQ9P1W8 387 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 NOP16Q9Y3C1 178 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 RIPK3Q9Y572 518 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM150BA6NC51 233 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 PEX12O00623 359 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 NRP1O14786 923 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ORC5O43913 435 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 TPST1O60507 370 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ATG12O94817 140 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 SPATA31D3P0C874 917 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 GRIA1P42261 906 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 PRKCZQ05513 592 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 RCAN2Q14206 197 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ARL9Q6T311 187 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 SPATA31D4Q6ZUB0 917 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 RNASE11Q8TAA1 199 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 LENG1Q96BZ8 264 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 DPEP2Q9H4A9 486 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 DKK3Q9UBP4 350 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 KLHL21Q9UJP4 597 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CDH7Q9ULB5 785 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 MGAT4AQ9UM21 535 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 STUB1Q9UNE7 303 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ARFGEF1Q9Y6D6 1849 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CROCCQ5TZA2 2017 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 A0A0X1KG70 313 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 SH3D21A4FU49 640 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 GFRA2O00451 464 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 SCDO00767 359 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 RPLP0P05388 317 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 FPR1P21462 350 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ARSFP54793 590 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 DSC2Q02487 901 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 MRPL49Q13405 166 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ZMYND11Q15326 602 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 IQCCQ4KMZ1 466 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CNSTQ6PJW8 725 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 MMAAQ8IVH4 418 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 POF1BQ8WVV4 589 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 SLC5A11Q8WWX8 675 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 RC3H2Q9HBD1 1191 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 DAPK2Q9UIK4 370 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 SLC27A5Q9Y2P5 690 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 PRSS51A0A1B0GVH4 220 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 FAM221BA6H8Z2 402 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ARHGEF33A8MVX0 844 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CLDN5O00501 218 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ADARP55265 1226 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 HSD17B7P56937 341 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CPSF6Q16630 551 aaKnown RBP eCLIP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 REEP3Q6NUK4 255 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 FBXL22Q6P050 247 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CFAP206Q8IYR0 622 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 FIBINQ8TAL6 211 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 KIAA1143Q96AT1 154 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 TRIM36Q9NQ86 728 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 IMP3Q9NV31 184 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF624Q9P2J8 865 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 MYBPHLA2RUH7 354 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 LINC00032P0C843 101 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms