RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 OR2B6P58173 313 aa15.48■□□□□ 0.07
LMNB1-201ENST00000261366 CAMK2GQ13555 558 aaPredicted RBP15.48■□□□□ 0.07
LMNB1-201ENST00000261366 ZNF181Q2M3W8 571 aa15.48■□□□□ 0.07
LMNB1-201ENST00000261366 CYP27C1Q4G0S4 372 aa15.48■□□□□ 0.07
LMNB1-201ENST00000261366 GALNT13Q8IUC8 556 aa15.48■□□□□ 0.07
LMNB1-201ENST00000261366 SKA2Q8WVK7 121 aaPredicted RBP15.48■□□□□ 0.07
LMNB1-201ENST00000261366 ZFYVE19Q96K21 471 aa15.48■□□□□ 0.07
LMNB1-201ENST00000261366 REEP1Q9H902 201 aa15.48■□□□□ 0.07
LMNB1-201ENST00000261366 SERHLQ9NQF3 203 aa15.48■□□□□ 0.07
LMNB1-201ENST00000261366 PLSCR3Q9NRY6 295 aa15.48■□□□□ 0.07
LMNB1-201ENST00000261366 NDRG4Q9ULP0 352 aaKnown RBP15.48■□□□□ 0.07
LMNB1-201ENST00000261366 ARIH1Q9Y4X5 557 aaPredicted RBP15.48■□□□□ 0.07
LMNB1-201ENST00000261366 DOCK3Q8IZD9 2030 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 GRXCR2A6NFK2 248 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 CA8P35219 290 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 RPS14P62263 151 aaKnown RBP15.47■□□□□ 0.07
LMNB1-201ENST00000261366 FKBP1BP68106 108 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 PARP15Q460N3 678 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 MORN1Q5T089 497 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 C16orf59Q7L2K0 433 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 UBE2J2Q8N2K1 259 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 LILRB4Q8NHJ6 448 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 KCNJ9Q92806 393 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 APOLD1Q96LR9 279 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 TSPAN18Q96SJ8 248 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 ZNF221Q9UK13 617 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 NOD1Q9Y239 953 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 PCDHGB6Q9Y5F9 930 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 FAM220BPB1ANY3 271 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 IFRD1O00458 451 aaPredicted RBP15.47■□□□□ 0.07
LMNB1-201ENST00000261366 INSIG1O15503 277 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 NTRK1P04629 796 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 DNAJA1P31689 397 aaKnown RBP15.47■□□□□ 0.07
LMNB1-201ENST00000261366 RPL9P32969 192 aaKnown RBP15.47■□□□□ 0.07
LMNB1-201ENST00000261366 TAF10Q12962 218 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 KEAP1Q14145 624 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 TAF1CQ15572 869 aaPredicted RBP15.47■□□□□ 0.07
LMNB1-201ENST00000261366 TAB1Q15750 504 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 BCL7AQ4VC05 210 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 ZC3H12BQ5HYM0 836 aaKnown RBP15.47■□□□□ 0.07
LMNB1-201ENST00000261366 ATAD3CQ5T2N8 411 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 MAL2Q969L2 176 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 IL1RAPQ9NPH3 570 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 UBA2Q9UBT2 640 aaPredicted RBP15.47■□□□□ 0.07
LMNB1-201ENST00000261366 PPT2Q9UMR5 302 aa15.47■□□□□ 0.07
LMNB1-201ENST00000261366 TNPO3Q9Y5L0 923 aaKnown RBP15.47■□□□□ 0.07
LMNB1-201ENST00000261366 MED26O95402 600 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 APOA1P02647 267 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 OPN1SWP03999 348 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 NUDT7P0C024 238 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 HOXD9P28356 352 aaPredicted RBP15.46■□□□□ 0.07
LMNB1-201ENST00000261366 MRPS6P82932 125 aaKnown RBP15.46■□□□□ 0.07
LMNB1-201ENST00000261366 ADAMTSL2Q86TH1 951 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 TSPYL5Q86VY4 417 aaPredicted RBP15.46■□□□□ 0.07
LMNB1-201ENST00000261366 FAM217AQ8IXS0 508 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 CEP19Q96LK0 163 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 BCL7BQ9BQE9 202 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 ACPTQ9BZG2 426 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 MAGIXQ9H6Y5 334 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 EXOSC4Q9NPD3 245 aaKnown RBP15.46■□□□□ 0.07
LMNB1-201ENST00000261366 SAMD4AQ9UPU9 718 aaKnown RBP15.46■□□□□ 0.07
LMNB1-201ENST00000261366 ISPDA4D126 451 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 CLDN24A6NM45 220 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 LOC110117498-PIK3R3F6TDL0 507 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 MANBAO00462 879 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 B4GALT3O60512 393 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 SLC25A14O95258 325 aaPredicted RBP15.46■□□□□ 0.07
LMNB1-201ENST00000261366 PDYNP01213 254 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 PTHP01270 115 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 EPOP01588 193 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 FPR1P21462 350 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 PCBP2Q15366 365 aaKnown RBP eCLIP15.46■□□□□ 0.072e-14■■■□□ 15.4
LMNB1-201ENST00000261366 NDUFA5Q16718 116 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 USP39Q53GS9 565 aaKnown RBP15.46■□□□□ 0.07
LMNB1-201ENST00000261366 SPANXN2Q5MJ10 180 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 ATG9BQ674R7 924 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 ANGPTL8Q6UXH0 198 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 NRARPQ7Z6K4 114 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 LACC1Q8IV20 430 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 SELENOMQ8WWX9 145 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 PANX1Q96RD7 426 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 PRRG3Q9BZD7 231 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 GPR63Q9BZJ6 419 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 RERGLQ9H628 205 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 CCNB1IP1Q9NPC3 277 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 SLC6A14Q9UN76 642 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 PCDHB9Q9Y5E1 797 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 PRSS21Q9Y6M0 314 aa15.46■□□□□ 0.07
LMNB1-201ENST00000261366 SAGE2PA6NJ88 616 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 HAT1O14929 419 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 ZW10O43264 779 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 ENGP17813 658 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 TACR2P21452 398 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 GZMMP51124 257 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 MED22Q15528 200 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 PROX2Q3B8N5 592 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 ARMCX4Q5H9R4 360 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 CACTIN-AS1Q8N1I8 211 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 STX19Q8N4C7 294 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 ZNF675Q8TD23 568 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms