RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 AASSQ9UDR5 926 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 PILRBQ9UKJ0 227 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 SUFUQ9UMX1 484 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 MEGF11A6BM72 1044 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 K7EM74 188 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 MSTNO14793 375 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 NCAM2O15394 837 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 KERAO60938 352 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 FSBPO95073 299 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 PDYNP01213 254 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 SRFP11831 508 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 JAK1P23458 1154 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 FMO4P31512 558 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 BDKRB1P46663 353 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 ELF3P78545 371 aaPredicted RBP5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 C6orf136Q5SQH8 315 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 ANKRD26P1Q6NSI1 321 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 OGFOD3Q6PK18 319 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 PATL1Q86TB9 770 aaKnown RBP5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 CCDC25Q86WR0 208 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 AHI1Q8N157 1196 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 CCNYQ8ND76 341 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 ITCHQ96J02 903 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 ZMYND15Q9H091 742 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 PIAS3Q9Y6X2 628 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 A0A0A6YYD5 115 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 C1orf232A0A0U1RR37 186 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 BTN3A1O00481 513 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 HOXA2O43364 376 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 ITGB6P18564 788 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 IFNA8P32881 189 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 CCT5P48643 541 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 MTTPP55157 894 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 LRRC32Q14392 662 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 TMED2Q15363 201 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 MAPK14Q16539 360 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 ADHFE1Q8IWW8 467 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 KDF1Q8NAX2 398 aaPredicted RBP5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 MYCBPQ99417 103 aaPredicted RBP5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 NDEL1Q9GZM8 345 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 LANCL2Q9NS86 450 aa5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 TEX10Q9NXF1 929 aaPredicted RBP5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 SMG5Q9UPR3 1016 aaKnown RBP5.4□□□□□ -1.55
TOPBP1-201ENST00000260810 H3BRJ5 948 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 PIP5K1BO14986 540 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 GSC2O15499 205 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 HPDP32754 393 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 PTGDSP41222 190 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 SMAD4Q13485 552 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 OGFOD2Q6N063 350 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 GALNT18Q6P9A2 607 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 RGL4Q8IZJ4 473 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 LZTR1Q8N653 840 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 POGLUT1Q8NBL1 392 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 OR5T3Q8NGG3 340 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 OR10Q1Q8NGQ4 319 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 HCAR2Q8TDS4 363 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 RSC1A1Q92681 617 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 CCDC68Q9H2F9 335 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 Q9H521 79 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 IL20RAQ9UHF4 553 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 MAD1L1Q9Y6D9 718 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 IGKV3D-11A0A0A0MRZ8 115 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 KLF7O75840 302 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 UNC5CO95185 931 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 DGKQP52824 942 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 GP2P55259 537 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 GFERP55789 205 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 C22orf34Q6ZV56 151 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 HEATR4Q86WZ0 1026 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 ATPAF2Q8N5M1 289 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 PCDH20Q8N6Y1 951 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 FBXO15Q8NCQ5 510 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 PPP4R1Q8TF05 950 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 LMAN2LQ9H0V9 348 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 MED4Q9NPJ6 270 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 NTMQ9P121 344 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 LIPT1Q9Y234 373 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 SPTAN1Q13813 2472 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 GMNCA6NCL1 334 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 ERI2A8K979 691 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 EFCAB14O75071 495 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 RNASEH2AO75792 299 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 ITPKAP23677 461 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 CD97P48960 835 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 ERFP50548 548 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 TMEM44Q2T9K0 475 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 ABRAXAS1Q6UWZ7 409 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 C4orf22Q6V702 233 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 BIVMQ86UB2 503 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF557Q8N988 423 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 SAP25Q8TEE9 199 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 UBLCP1Q8WVY7 318 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 PHF21BQ96EK2 531 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 DCLRE1CQ96SD1 692 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 DDOQ99489 341 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 PPCSQ9HAB8 311 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 NMRAL1Q9HBL8 299 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 SELENONQ9NZV5 590 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms