RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 HLA-DQB2P05538 268 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 ANXA8P13928 327 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 KCNA5P22460 613 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 GRK5P34947 590 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 NCS1P62166 190 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 SREBF2Q12772 1141 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 CHIT1Q13231 466 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 CEACAM7Q14002 265 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 SCGB2B2Q4G0G5 96 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 MPPE1Q53F39 396 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 KIAA0930Q6ICG6 404 aaPredicted RBP9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 SLC30A6Q6NXT4 461 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 PIWIL3Q7Z3Z3 882 aaKnown RBP9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 STOML3Q8TAV4 291 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 GATA6Q92908 595 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 COL21A1Q96P44 957 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 IFT46Q9NQC8 304 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 CD84Q9UIB8 345 aa9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 CHD2O14647 1828 aaKnown RBP9.52□□□□□ -0.88
CTDSPL2-201ENST00000260327 C2orf92A0A1B0GVN3 265 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 ENPP3O14638 875 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 SSR2P43308 183 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 GPR1P46091 355 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZNF627Q7L945 461 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 KLHL36Q8N4N3 616 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 SLC43A3Q8NBI5 491 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 KLHL6Q8WZ60 621 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 HERPUD2Q9BSE4 406 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 OXCT2Q9BYC2 517 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 TCF7L1Q9HCS4 588 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 H3BSH0 61 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 PRKCGP05129 697 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZNF24P17028 368 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 ENGP17813 658 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 ASMTP46597 345 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 CLCN4P51793 760 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 SEMG2Q02383 582 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 SRSF11Q05519 484 aaKnown RBP9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 SLC3A1Q07837 685 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 IGFN1Q86VF2 1251 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 CADM2Q8N3J6 435 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 FIBCD1Q8N539 461 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 PQLC3Q8N755 202 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 OR2L5Q8NG80 312 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZNF675Q8TD23 568 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 ADAMTS15Q8TE58 950 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 LGALS12Q96DT0 336 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 SPACA7Q96KW9 195 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 MCCC1Q96RQ3 725 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 PKP4Q99569 1192 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 MYOCQ99972 504 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 ASPNQ9BXN1 380 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 NUSAP1Q9BXS6 441 aaKnown RBP9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 FZD8Q9H461 694 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 ANKHQ9HCJ1 492 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 DNAJC27Q9NZQ0 273 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 HCN3Q9P1Z3 774 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 ZNF639Q9UID6 485 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 FBXL3Q9UKT7 428 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 ASF1AQ9Y294 204 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 NUPL2O15504 423 aaKnown RBP9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 CHP2O43745 196 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 JAG1P78504 1218 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 SGCGQ13326 291 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 SIX1Q15475 284 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 C6orf141Q5SZD1 244 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 PPP2R2DQ66LE6 453 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 CES5AQ6NT32 575 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 RTL4Q6ZR62 310 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 HFE2Q6ZVN8 426 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 COLGALT2Q8IYK4 626 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 GPC2Q8N158 579 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 DEDD2Q8WXF8 326 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 MINDY3Q9H8M7 445 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 PCDHB1Q9Y5F3 818 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 SLC7A4O43246 635 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 PAPSS2O95340 614 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 CKMT1AP12532 417 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 PEPDP12955 493 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 BMXP51813 675 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 SKP1P63208 163 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 SCARB2Q14108 478 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 FAM214AQ32MH5 1076 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 TMED4Q7Z7H5 227 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 TMEM126BQ8IUX1 230 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 TOR1AIP2Q8NFQ8 470 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 TXLNGYQ9BZA5 131 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 SMURF1Q9HCE7 757 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 THUMPD1Q9NXG2 353 aaKnown RBP9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 PCDHB3Q9Y5E6 796 aa9.52□□□□□ -0.89
CTDSPL2-201ENST00000260327 MCIDASD6RGH6 385 aa9.51□□□□□ -0.89
CTDSPL2-201ENST00000260327 H3BMQ9 156 aa9.51□□□□□ -0.89
CTDSPL2-201ENST00000260327 SAP18O00422 153 aaKnown RBP9.51□□□□□ -0.89
CTDSPL2-201ENST00000260327 SLC25A12O75746 678 aa9.51□□□□□ -0.89
CTDSPL2-201ENST00000260327 FSHRP23945 695 aa9.51□□□□□ -0.89
CTDSPL2-201ENST00000260327 BTG3Q14201 252 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL2-201ENST00000260327 PABPC1LQ4VXU2 614 aaKnown RBP9.51□□□□□ -0.89
CTDSPL2-201ENST00000260327 CMPK2Q5EBM0 449 aa9.51□□□□□ -0.89
CTDSPL2-201ENST00000260327 CRB2Q5IJ48 1285 aa9.51□□□□□ -0.89
CTDSPL2-201ENST00000260327 AGMOQ6ZNB7 445 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms