RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 MAP4P27816 1152 aaKnown RBP16.19■□□□□ 0.18
SDCBP-201ENST00000260130 RAB15P59190 212 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 SH3BP2P78314 561 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 HSD11B2P80365 405 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 POU4F1Q01851 419 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 LMNTD1Q8N9Z9 388 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 SNIP1Q8TAD8 396 aaKnown RBP16.19■□□□□ 0.18
SDCBP-201ENST00000260130 SLC22A18Q96BI1 424 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 CYTH2Q99418 400 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 DDA1Q9BW61 102 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 ASPSCR1Q9BZE9 553 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 SSU72Q9NP77 194 aaKnown RBP16.19■□□□□ 0.18
SDCBP-201ENST00000260130 SPATA7Q9P0W8 599 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 FETUBQ9UGM5 382 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 PCDHGA3Q9Y5H0 932 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 SLC9B1P1A6NJY1 282 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 PRAMEF10O60809 474 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 TSPAN12O95859 305 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 PEBP1P30086 187 aaKnown RBP16.18■□□□□ 0.18
SDCBP-201ENST00000260130 SPRP35270 261 aaPredicted RBP16.18■□□□□ 0.18
SDCBP-201ENST00000260130 SLC12A2P55011 1212 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 FOXM1Q08050 763 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 DCAF12Q5T6F0 453 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 HHATQ5VTY9 493 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 ANKS6Q68DC2 871 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 UBE2R2Q712K3 238 aaPredicted RBP16.18■□□□□ 0.18
SDCBP-201ENST00000260130 FLVCR1-AS1Q8TAF5 88 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 HMGCLL1Q8TB92 370 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 LRRC37BQ96QE4 947 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 ZMIZ1Q9ULJ6 1067 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 L3MBTL1Q9Y468 752 aa16.18■□□□□ 0.18
SDCBP-201ENST00000260130 POLR1CO15160 346 aaPredicted RBP16.17■□□□□ 0.18
SDCBP-201ENST00000260130 FAM155BO75949 473 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 C8GP07360 202 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 CLNS1AP54105 237 aaKnown RBP16.17■□□□□ 0.18
SDCBP-201ENST00000260130 PCBP4P57723 403 aaKnown RBP16.17■□□□□ 0.18
SDCBP-201ENST00000260130 EFTUD2Q15029 972 aaKnown RBP eCLIP16.17■□□□□ 0.18
SDCBP-201ENST00000260130 TMEM207Q6UWW9 146 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 CEP97Q8IW35 865 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 D2HGDHQ8N465 521 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 PMEPA1Q969W9 287 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 PDLIM5Q96HC4 596 aaKnown RBP16.17■□□□□ 0.18
SDCBP-201ENST00000260130 OR6C1Q96RD1 312 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 PKP4Q99569 1192 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 GPR22Q99680 433 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 MYLK2Q9H1R3 596 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 ACSS3Q9H6R3 686 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 SYTL2Q9HCH5 934 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 APMAPQ9HDC9 416 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 FOXJ2Q9P0K8 574 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 RAXQ9Y2V3 346 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 B3GALT1Q9Y5Z6 326 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 EDF1O60869 148 aaKnown RBP16.17■□□□□ 0.18
SDCBP-201ENST00000260130 ST6GAL1P15907 406 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 ZNF37AP17032 561 aaPredicted RBP16.17■□□□□ 0.18
SDCBP-201ENST00000260130 ZNF460Q14592 562 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 USP10Q14694 798 aaKnown RBP16.17■□□□□ 0.18
SDCBP-201ENST00000260130 CYP2A13Q16696 494 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 SLC5A12Q1EHB4 618 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 NKAPQ8N5F7 415 aaKnown RBP16.17■□□□□ 0.18
SDCBP-201ENST00000260130 MCOLN3Q8TDD5 553 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 DLG3Q92796 817 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 TRAPPC9Q96Q05 1148 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 TEFMQ96QE5 360 aaKnown RBP16.17■□□□□ 0.18
SDCBP-201ENST00000260130 CTRCQ99895 268 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 ZPBPQ9BS86 351 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 SLC12A9Q9BXP2 914 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 LRMDAQ9H2I8 198 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 POPDC3Q9HBV1 291 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 SOHLH2Q9NX45 425 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 ADAMTS6Q9UKP5 1117 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 BTRCQ9Y297 605 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 PCDHB11Q9Y5F2 797 aa16.17■□□□□ 0.18
SDCBP-201ENST00000260130 LAMA5O15230 3695 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 SLC16A5O15375 505 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 ZWINTO95229 277 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 RPSAP08865 295 aaKnown RBP16.16■□□□□ 0.18
SDCBP-201ENST00000260130 ERGP11308 486 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 FOLR1P15328 257 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 RPA3P35244 121 aaPredicted RBP16.16■□□□□ 0.18
SDCBP-201ENST00000260130 HSD17B2P37059 387 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 SP140Q13342 867 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 IL11RAQ14626 422 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 KCNAB1Q14722 419 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 ARHGAP19Q14CB8 494 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 ST3GAL2Q16842 350 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 SPDYAQ5MJ70 313 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 TMTC4Q5T4D3 741 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 CEACAM20Q6UY09 585 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 ZNF248Q8NDW4 579 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 ERP27Q96DN0 273 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 TSPAN17Q96FV3 270 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 CAB39LQ9H9S4 337 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 PARVBQ9HBI1 364 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 GPAMQ9HCL2 828 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 ACSL6Q9UKU0 697 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 TRIM33Q9UPN9 1127 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 A0A0J9YY10 115 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 MAP3K7O43318 606 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 PRICKLE3O43900 615 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms